DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubpl and nubpl

DIOPT Version :10

Sequence 1:NP_610143.3 Gene:Nubpl / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_001002442.1 Gene:nubpl / 436715 ZFINID:ZDB-GENE-040718-140 Length:327 Species:Danio rerio


Alignment Length:268 Identity:122/268 - (45%)
Similarity:173/268 - (64%) Gaps:7/268 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QVKLMARGLPKKQPIIGVQDIIVVASGKGGVGKSTVAVNFACSLA--KLGKRVGLLDGDIFGPTI 83
            |.:.|||||||::||.||:::||||||||||||||.|||.|..|.  :..|.|||||.|:|||::
Zfish    57 QKQHMARGLPKQKPIAGVKEVIVVASGKGGVGKSTTAVNLALGLMANEQSKLVGLLDADVFGPSV 121

  Fly    84 PLLMNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQRLLKGTDWGLLD 148
            |.|||:.|.|.:.:||||.|..|:.:.|:|:|.|......::|||.:|||||::|::..|||.||
Zfish   122 PKLMNLKGNPELTEKNLMRPLVNFGIPCMSIGFLVEDVAPIVWRGLMVMSAIEKLIRQVDWGNLD 186

  Fly   149 VLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFGVVENMKYTI 213
            .||||.|||||||.||::|:.||.|.::|:||...|:....:||.|:.|:|||:.|:|:||....
Zfish   187 YLVIDMPPGTGDVQLSITQNIPIAGAVIVSTPQDIALMDARRGAEMFRKVNVPVLGLVQNMSVFQ 251

  Fly   214 CQNCNQRLEFFKDSRISSLPRK-----LISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAE 273
            |..||.:...|.......|.:.     |..:||...|.::::.|.|||:..|||..:..:.::|.
Zfish   252 CPKCNHQTHIFGSDGAKELAQTLGVELLGDIPLHLNIRETSDMGQPVVVSSPDSPEAEAYRRIAA 316

  Fly   274 EITQILNE 281
            .:.:.|.|
Zfish   317 AVVRRLAE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NubplNP_610143.3 ParA 37..275 CDD:431392 110/244 (45%)
nubplNP_001002442.1 ParA 73..319 CDD:431392 110/245 (45%)

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