DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubpl and nubp2

DIOPT Version :10

Sequence 1:NP_610143.3 Gene:Nubpl / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:XP_012825448.1 Gene:nubp2 / 100125178 XenbaseID:XB-GENE-999229 Length:270 Species:Xenopus tropicalis


Alignment Length:253 Identity:88/253 - (34%)
Similarity:140/253 - (55%) Gaps:16/253 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GVQDIIVVASGKGGVGKSTVAVNFACSLAKLGKRVGLLDGDIFGPTIPLLMNVHGEPVVNDKNLM 101
            |||.||:|.||||||||||::...|.:|...||:||:||.|:.||:||.::|...:.|....:..
 Frog    12 GVQHIILVLSGKGGVGKSTISTEIALALRHAGKKVGILDVDLCGPSIPRMLNAQSKDVHQCDSGW 76

  Fly   102 IP---PQNYNVKCLSMG-MLTPVETSVIWRGPLVMSAIQRLLKGTDWGLLDVLVIDTPPGTGDVH 162
            :|   .|..::..:|:| :|...:.:|:||||...:.|::......||.||.|::||||||.|.|
 Frog    77 VPVYVDQEKSISLMSIGFLLEHPDDAVVWRGPKKNALIKQFASDVAWGDLDFLIVDTPPGTSDEH 141

  Fly   163 L----SLSQHAPITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEF 223
            :    :|....|: |.:|||||...:|....:..:..:|..:.:.|:||||...:|.:|.:....
 Frog   142 IATVDALRPFNPM-GALLVTTPQAVSVGDVRRELTFCKKTGLRVIGIVENMSGYVCPHCTECTNI 205

  Fly   224 FKD------SRISSLPRKLISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEI 275
            |..      :|:|.:| .|..:|||..::.|.|.|...|.::|:|......:.:|.:|
 Frog   206 FSKGGGEELARLSGVP-FLGCVPLDPLLSQSLEQGKDFVQEFPNSAAYPAISSIARQI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NubplNP_610143.3 ParA 37..275 CDD:431392 87/251 (35%)
nubp2XP_012825448.1 ParA 12..263 CDD:431392 88/253 (35%)

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