DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir68a

DIOPT Version :10

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:721 Identity:151/721 - (20%)
Similarity:245/721 - (33%) Gaps:219/721 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FLQRLHRSNYKSVVFSQTELFFQHIEEN---------LQG--ANECISLILDEPNQLLNSLHDRH 127
            |:.|.:.|:.......|.|||.:.|:.:         |.|  ....:..|.|  |:.||......
  Fly    82 FVMRTNESDDLQRPSRQVELFVKAIKSSDCELNVITILNGWQVQRFLGYIYD--NRSLNMQKKFV 144

  Fly   128 LGHRLSLF----IFYWGA-------------RWPPSSRVIRFREPLRVVVVTRPRKKAFRIYYNQ 175
            |.|.|.||    |..|..             ::..|:  |.|...|..|:|.:            
  Fly   145 LLHDLRLFESDMIHLWSVFIDAIFLKRQLDNKYTIST--IAFPGILSGVLVMK------------ 195

  Fly   176 ARPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVF-HSPPWFWVTYCNNSFE 239
                     .:.||..|..|. .||......    :|..|.:..|.:. |.|...|.. ...||:
  Fly   196 ---------NIANWELGKGLN-GRILFADKT----SNLFGTSLPVAISEHVPMVLWAN-ATKSFQ 245

  Fly   240 EDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSE-DGKDSNDSFT 303
                                |.:..::..|.|.:||:..|.: |.:|:....:| ||..|....:
  Fly   246 --------------------GVEVEIMNALGKALNFKPVYYK-PNQTENMDWTELDGGASVAYGS 289

  Fly   304 GG-IGLLQSG--------------QADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLN 353
            |. .|..|:|              .|.|.:||:.|.....|.:|.|.....:...|.|......|
  Fly   290 GNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDN 354

  Fly   354 EALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYI---------WRRRWANSDVEHLGELYIH 409
            .....:.||...:|..::|::...|.:||.|..|..|         :|....|.:|....::|..
  Fly   355 SWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRR 419

  Fly   410 MTYLKEITPRLLKLKPRTVLSAH------QMPHQLFQ---KCIWFTLRLFLKQSCNELHNGYRAK 465
            :::             |..:|.:      :||..||.   .||..|..:.|..:...:...:..:
  Fly   420 ISF-------------RIAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLR 471

  Fly   466 FLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLE 530
            .||..|||....::| .|.|..|:..|.||....|:||:        |..|.::...:.:.|   
  Fly   472 VLTGWYWIYCILLVA-TYRASFTAILANPAARVTIDTLE--------DLLRSHIPPSTGATE--- 524

  Fly   531 NGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQ----YGS 591
                        .||        ||:   ||..::..:.||...|.|..:.|...:.:    |..
  Fly   525 ------------NRQ--------FFL---EANDEVARKVGEKMEVFGYSDDLTSRIAKGQCAYYD 566

  Fly   592 NNFQLSQKLYTRYSAVAVQIG--------C----PFLGSL--NNVL--------MQLFESGILDK 634
            |.|      |.||..||.:.|        |    |.:.::  |:.|        ..|.|.|::.|
  Fly   567 NEF------YLRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGGLIAK 625

  Fly   635 MTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAG 699
            .                 .|.:::...:||.::.|:.       :|::....:|:||.:|.:.:.
  Fly   626 W-----------------LKDAIEHLPAEALAQQEAL-------MNIQKFWSSFVALLIGYVISM 666

  Fly   700 VILLLE 705
            :.||.|
  Fly   667 LTLLAE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 23/86 (27%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 26/117 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 34/166 (20%)
Ir68aNP_648455.2 Lig_chan 367..661 CDD:459656 76/371 (20%)

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