DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir62a

DIOPT Version :10

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster


Alignment Length:772 Identity:145/772 - (18%)
Similarity:240/772 - (31%) Gaps:262/772 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPYLLGLLNSTRLTFIGNDESDTAIALTQIVR--GLQQSSLAILALPSLALSDGVCQKERNVYLD 72
            |.:|..|..| |...:..:..|.|..|...:.  |......||..:.||...|       ..|||
  Fly     3 LQFLFALFLS-RYQIVATENFDRAFELALFLDRIGRVHRLHAITIVNSLGSVD-------PSYLD 59

  Fly    73 DFLQRLHR------SN--YKSVVFSQTELFFQHIEENLQGANECISLIL--DEPNQLLNSLHDRH 127
            |    |||      ||  |.....:.|:....|:..:.....|.|.|:.  |..:.::....:|.
  Fly    60 D----LHRGLMCNSSNHFYMLPQMTATDKDSSHVHFSSLQDEETIYLVFARDSKDAVIYLQAERA 120

  Fly   128 LGHRL--SLFI-----------FYWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIYYNQARPC 179
            .|.|.  ::|:           :::...|.     ::||..| |||..|                
  Fly   121 RGRRYTRTMFLLRKQESQKDIKYFFELLWK-----LQFRSAL-VVVAAR---------------- 163

  Fly   180 SDSQLQLVNWYDGDNLGLQRIPLLPTALSVY-----------ANFKGRTFRVPVFHS-PPWFWVT 232
                    |:|..|.....|: :....||.|           .||:|...|:||... |..||  
  Fly   164 --------NFYQMDPYPTVRV-IRMRRLSSYDPHHVFPPANRKNFRGYRMRLPVQQDVPNTFW-- 217

  Fly   233 YCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMN-----FRFKYIEAPGRTQGSMRS 292
            |.|               .:.|.....|....|:..|..|:|     |||:              
  Fly   218 YKN---------------RRTKAWELAGLGGILINQLMMHLNVTMDLFRFE-------------- 253

  Fly   293 EDGKDSNDSFTGGIGLL-QSGQADFFL-GDVGLS------WERRKAIEFSFFTLADSGAFATHAP 349
                      ..|..|| .:...|..: |.|.||      .:...::::|:.|......|.....
  Fly   254 ----------VNGSSLLNMAALTDLIVKGKVELSPHLYDTLQSNTSVDYSYPTQVAPRCFMIPLD 308

  Fly   350 RRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLK 414
            ..::.:|.:..||...:|..|:..:                               |.:|..|::
  Fly   309 NEISRSLYVFLPFSLTMWLCLLFVL-------------------------------LVVHFVYVR 342

  Fly   415 EITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYR---AKFLTIVYWIAAT 476
            .:.|           ..|          .|..|.:   ....::..|.|   .:|.|.:. :...
  Fly   343 RLIP-----------DGH----------FWAILGV---PGAGQVRYGNRKPVRRFSTFLI-LFGI 382

  Fly   477 YVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYV-------------EKESSSLEM 528
            ::|...||.:|||.........|.|:|:.|...    .||:.|             ..|..|.:.
  Fly   383 FILGQTYSTKLTSSLTVTLIRRPDNSLEELFLL----PYRILVLPTDVYAIVDSLGHAEQFSTKF 443

  Fly   529 LENGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNN 593
            .....|.|.|....|..:.|     :.|.::                    ...||::||    .
  Fly   444 SCTDAENFSQKRISMHPEYI-----YPISTI--------------------RWRFFDMQQ----R 479

  Fly   594 FQLSQKLYTRYSAVA---------VQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEA 649
            |...::.|  :|.:.         :::......:|:..|:.:.::|:.|......|.|.::    
  Fly   480 FLRKKRFY--FSKICHGSFPYQYQLRVDSHLKDALHRFLLHVQQAGLHDLWLDTCYRKAHR---- 538

  Fly   650 TRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706
                .|.::..::.|    |..:...:.||.|.:|..||.....|.|.:|:..|:||
  Fly   539 ----MGYLKDFSTLA----ELEEKLRLRPLALNLLVPAFSLFLCGMLGSGIAFLVEI 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 16/83 (19%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 16/101 (16%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 26/162 (16%)
Ir62aNP_001033986.1 None

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