DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir40a and LOC11175900

DIOPT Version :10

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_003437077.2 Gene:LOC11175900 / 11175900 VectorBaseID:AGAMI1_003275 Length:652 Species:Anopheles gambiae


Alignment Length:754 Identity:154/754 - (20%)
Similarity:274/754 - (36%) Gaps:208/754 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGNDESDTAI-ALTQ-IVRGLQQSSLAILALPSLALSDGVCQKERNVYLDDFLQRLHRS---NYK 84
            :||..|:..: |||: .|:  ..||..::.|.:  :|||....:.:: :|:.:||..||   .::
Mosquito    34 VGNHLSEVIVNALTRYYVQ--NHSSTQVMRLST--VSDGTYDLQSDI-MDEVMQRTSRSIAYEFR 93

  Fly    85 SVVF-SQTELFFQHIEENLQGANECISLILDEPNQLLNSL---HDRHLGHRLSLFIFYWGARWPP 145
            |.:. |:....|.....:..||.|          ||..||   .:...|:.|.:...| |.|..|
Mosquito    94 SALGPSRRPRIFNIAFVDGYGAFE----------QLFRSLDPAENDFAGYYLIVLTAY-GRRIAP 147

  Fly   146 S--SRVIRFREPLRVVVV----------TRPRKKAFRIY--YNQARPCSDSQLQLVNWY-DGDNL 195
            .  :|:......:.|:.|          :|.:......|  |.....|......|::.: .|..|
Mosquito   148 DTLARIFALLWTMNVINVNIVSADLEDQSRWQSVLMHTYYPYRAGGNCERIVPHLLHRFRKGQRL 212

  Fly   196 GLQRIPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGG 260
            . :.:.|.|:.||   |..|....|..||.||:..:|....                     .||
Mosquito   213 D-RSVELFPSKLS---NLHGCPVTVGTFHLPPYMLLTPAGR---------------------YGG 252

  Fly   261 RDHRLLMLLSKHMNFRFKYI-----EAPGRTQG-------SMRSEDGKDSNDSFTGGIGLLQSGQ 313
            .:..||..||:.:||..:.:     |..|||..       :.|:..|.   .|.:|.:.|:.:.:
Mosquito   253 LEGDLLRALSRKLNFTVRLVVPDDGELWGRTPSPSVVVADANRTRGGA---SSASGCVRLVLTER 314

  Fly   314 ADFFLGDVGLSWERRKAIEF--SFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIF 376
            .:..||...:..:|...::.  |::|:  ....|..|.|.......:.|||.:.:|. |:...:.
Mosquito   315 VNLTLGRFAIRGDRNLVMKSSRSYYTV--RMVLAVPAGREYTPFEKLFRPFSRSVWV-LVTLYLL 376

  Fly   377 SGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVL---SAHQMPHQL 438
            :|.:..|.:.|.:    |.|..|          ..|.:.::..:|.|  .:||   :..|:|.:.
Mosquito   377 AGMVVIGTVQLLH----RPAVRD----------FVYGRGVSTPVLNL--LSVLFGGAVVQLPMRN 425

  Fly   439 FQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTL 503
            |.:.:     |||                    |:....|:...|...|...........|:.|:
Mosquito   426 FARTL-----LFL--------------------WMYYCLVVRTCYQGSLYEYLQERKNFSPLQTV 465

  Fly   504 QRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGI-KLIA 567
            .    |::.:.||.|      ||    :||.|:.:....:..::.      ::...:|.: :|:.
Mosquito   466 D----ALVRNDYRFY------SL----HGTSLYLEQMPQILSRIT------WLPDDDASVDRLLT 510

  Fly   568 EGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGI- 631
            |....:|:   ...||.::::...:|     :.|.|...|.:.          ||::.....|| 
Mosquito   511 ELATRQAL---TSALFIDLERVAYHN-----RFYVRGGLVYIA----------NVVLVRLPIGIY 557

  Fly   632 --------------LDKMTAAEYAK----QYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISP 678
                          ||::..:.|..    .|...:|   :||....:             .:.:|
Mosquito   558 YPKKSCLANRFDHELDRLRTSGYVSYRLGHYLNYDA---FKGPADYQ-------------PLPTP 606

  Fly   679 LNLRMLQGAFIAL-GVGSLAAGVILLLEIV---FIKLDQ 713
            |....|.|.:..| |:..:|.| :||||:.   |:.|.|
Mosquito   607 LTTDQLVGCYETLFGLLLVATG-LLLLELASRWFVSLRQ 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 19/84 (23%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 19/95 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 27/156 (17%)
LOC11175900XP_003437077.2 None

Return to query results.
Submit another query.