DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and plekhj1

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_989166.1 Gene:plekhj1 / 394773 XenbaseID:XB-GENE-491518 Length:149 Species:Xenopus tropicalis


Alignment Length:109 Identity:25/109 - (22%)
Similarity:41/109 - (37%) Gaps:34/109 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   611 KRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFATGGADIIKACKTDSE 675
            |:|...|..|.|:||. ..::||.|.:.||             ||            :..|.|.:
 Frog    34 KKRLVKLVVNFLFYFR-IDEEEPIGALLLE-------------HC------------RVSKEDEK 72

  Fly   676 G---KVVEGKHTVYRMSAATEEDQQEWIKRLTQSISHNPFYDIL 716
            |   ..::.....|....:::|...||::.||     |..|:.:
 Frog    73 GFSIHFIDEPEKKYMFECSSQEQCVEWVEALT-----NASYEFM 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680
PH_GRP1-like 592..710 CDD:269954 23/101 (23%)
PH 596..708 CDD:278594 23/99 (23%)
plekhj1NP_989166.1 PH_PLEKHJ1 1..112 CDD:270078 25/109 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.