DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and PLEKHM3

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001073944.1 Gene:PLEKHM3 / 389072 HGNCID:34006 Length:761 Species:Homo sapiens


Alignment Length:577 Identity:114/577 - (19%)
Similarity:188/577 - (32%) Gaps:236/577 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 SRPVELLLNENGEI-IARRSPRKSRS--------------NSLGRMLDVQNEIG-TGGLFMEADP 281
            :|.|:.:|.:|.:: :...||.::..              ..:||    |||:. :.||....|.
Human   273 ARMVDTVLYDNTQLQLKAESPWEALDWGQKLWEVVHAAVPGYMGR----QNELTISPGLGHHDDY 333

  Fly   282 CSKNS--------LPPPPYIDDMRFIDDSSNSQSESERNSNIHKTN---KYTSKNN--------- 326
            ...:|        |||.|.:|             .|::..||.|:.   :.|.:||         
Human   334 TQNHSFQKKTSGLLPPSPVLD-------------SSKQYQNILKSGTLYRLTVQNNWKAFTFVLS 385

  Fly   327 --------------------NNDSKRESQQSNL--CESCRMLLDRNYINTEQSDNLVILRRPSKQ 369
                                |.|.....|..||  |:||..::        ...:::.||..::|
Human   386 RAYLMAFQPGKLDEDPLLSYNVDVCLAVQMDNLDGCDSCFQVI--------FPQDVLRLRAETRQ 442

  Fly   370 IKDELCEVVSEMEALDVPED-CKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHF 433
            ...|.      ||||.:..: .:.|.::.|::                      ||:.|:|    
Human   443 RAQEW------MEALKIAANVARSSEQNLQVT----------------------LRNKPKD---- 475

  Fly   434 LYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKID--- 495
                      .:|.:...||. .:.|..:|:::  .|.|.|.:.|.  ..||:..|..:.|.   
Human   476 ----------QMGGHELRKNK-RQSVTTSFLSI--LTTLSLERGLT--AQSFKCAGCQRSIGLSN 525

  Fly   496 ---RMMETFAQRYCQLNPDIFTNTDTCYV-LSFAI---IMLN--TSLHNPSVKDKPTVDQFISMN 551
               ::.......||          .:|:| .||.|   |:.|  ||.:..|.:.|.         
Human   526 GKAKVCNYSGWYYC----------SSCHVDDSFLIPARIVHNWDTSKYKVSKQAKE--------- 571

  Fly   552 RGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLWKQGGRYKSWKRRWFI 616
                        .||.:||    ||....|.:...|.|   :.:....:.:...|.||.:...| 
Human   572 ------------FLEYVYE----EPLIDIQQENAMLYH---HAEPLAAVLRLRQRLKSLRAYLF- 616

  Fly   617 LNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFATGGADIIKACKTDSEGKVVEG 681
               :|.   ....:...|.|.|.|.: :::||         |::.  ||:         .:|:||
Human   617 ---SCR---AAVAEDLRRRIFPREYL-LQQIH---------LYSL--ADL---------QQVIEG 654

  Fly   682 K--------------HTVYRMSAATEEDQQEWIKRLTQSISHN-----PFYDILVQR 719
            |              | ||..|..::       |.....|.:|     ||.||...|
Human   655 KLAPFLGKVIKFATSH-VYSCSLCSQ-------KGFICEICNNGEILYPFEDISTSR 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 36/191 (19%)
PH_GRP1-like 592..710 CDD:269954 24/131 (18%)
PH 596..708 CDD:278594 23/125 (18%)
PLEKHM3NP_001073944.1 PH_PLEKHM3_1 214..303 CDD:270193 6/29 (21%)
PH 362..454 CDD:278594 21/105 (20%)
PH_PLEKHM3_2 364..451 CDD:270136 18/100 (18%)
zf-RING_9 529..729 CDD:290612 52/249 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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