DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and Iqsec2

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_006528905.1 Gene:Iqsec2 / 245666 MGIID:3528396 Length:1520 Species:Mus musculus


Alignment Length:635 Identity:160/635 - (25%)
Similarity:239/635 - (37%) Gaps:198/635 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 FQSESPESRRSNSTFYVNTQNVSSAVFKDNRQPLLER--------GSGSDSSPSSVC-------- 114
            |..|..|..::.:.|.....::........|...|||        |.|.|...|||.        
Mouse   424 FSFEEYEKAQNPAYFEGKPASLDEGAMAGARSHRLERGLPYGGSCGGGIDGGGSSVTTSGEFSND 488

  Fly   115 -----------VRCSCNSITK------SGDRNETP----------------TMATPKSDIKIALK 146
                       |:....||.:      ||..:|.|                :.||..||:.:.|.
Mouse   489 ITELEDSFSKQVKSLAESIDEALNCHPSGPMSEEPGSAQLEKRESKEQQEDSSATSFSDLPLYLD 553

  Fly   147 PPPKPRSPSMAPYTSVATYNITKL-APDSPPPASPTLSTQT----------------VNCSDVTT 194
            .|..|.||...|.|........:. ||...||..|.:...|                :.|.|...
Mouse   554 DPVPPPSPERLPSTEPPPQGRPEFWAPAPLPPVPPPMPPGTREDGSREEGTRRGPGCLECRDFRL 618

  Fly   195 KVTEVQRLPCDEPNTELISKRTEYKHTTITTTTRTLIVSRPVELLLNENGEIIARRSPRKSRSNS 259
            :...:..|..:.|:...:.                                 ::.||.|.|    
Mouse   619 RAAHLPLLTIEPPSDSSVD---------------------------------LSDRSDRGS---- 646

  Fly   260 LGRMLDVQNEIGTGGLFMEADPCSKNS-------------------------------LPPPPY- 292
                  |..:     |..|||.||.:.                               |||.|. 
Mouse   647 ------VHRQ-----LVYEADGCSPHGTLKHKGPPGRAPIPHRHYPAPEGPAPAPPGPLPPAPNS 700

  Fly   293 ------IDDMRFI-------DDSSNSQSES-ERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESC 343
                  :...|.:       ::|....:|| |.:||.::|...:|.:::.||.||...:.||:..
Mouse   701 GTGPSGVAGGRRLGKCEAAGENSDGGDNESLESSSNSNETINCSSGSSSRDSLREPPATGLCKQT 765

  Fly   344 RMLLDRNYINTEQSDNLVILRRPSKQIKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNM 408
            .....|:..::...:|.|:.||                                ...||...||.
Mouse   766 YQRETRHSWDSPAFNNDVVQRR--------------------------------HYRIGLNLFNK 798

  Fly   409 DPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEK-NDFNEDVLKAFVALHDFTNL 472
            .|:|||:||:|...|...|..||||:.:.:||::..||::||.: ..||.|||...|...||:::
Mouse   799 KPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSSM 863

  Fly   473 ILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDI---FTNTDTCYVLSFAIIMLNTSLH 534
            .|..|||:|....|:.|||||::|::|.|:||||..||.:   |.|.||.::|:||||:|||.::
Mouse   864 DLDDALRKFQSHIRVQGEAQKVERLIEAFSQRYCVCNPALVRQFRNPDTIFILAFAIILLNTDMY 928

  Fly   535 NPSVK--DKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQD 582
            :||||  .|..:|.||...||::||.|:||.||..:|:.|:....:...|
Mouse   929 SPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGIYQRIQGRELRTNDD 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 82/187 (44%)
PH_GRP1-like 592..710 CDD:269954
Iqsec2XP_006528905.1 GAS 26..>146 CDD:464001
Sec7 785..973 CDD:460178 84/219 (38%)
IQ_SEC7_PH 995..1124 CDD:465120
KLF1_2_4_N <1350..1457 CDD:425360
Blue background indicates that the domain is not in the aligned region.

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