DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and AgaP_AGAP002729

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_312197.3 Gene:AgaP_AGAP002729 / 1273239 VectorBaseID:AGAP002729 Length:948 Species:Anopheles gambiae


Alignment Length:504 Identity:96/504 - (19%)
Similarity:162/504 - (32%) Gaps:183/504 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 LRRPSKQIKD----ELCEVVSEME-----------------ALDVPEDCK--HSNKDKQMSIGRK 404
            |..||...:|    :|.::..|::                 |:..|.:.:  |...|:..:  .:
Mosquito    23 LGSPSTGSEDGGGIDLADIAQELDQDEFDGPATLNGAFDRPAITAPPESEWYHGRLDRYSA--EQ 85

  Fly   405 KFNMDPKKGIEYLVENRLLRHDPQDVAHFL-YKGE-GLNK---TAI-GD-YLGEKNDFN------ 456
            :.....|.| .|||.    ..|.:..::.| |.|. |:|.   ||: || |:|.:..|:      
Mosquito    86 RLKSTTKLG-SYLVR----ESDRKPGSYVLSYLGRTGINHFRITAVCGDFYIGGRQFFSLSDLVG 145

  Fly   457 -----EDVL------------------KAFVALHDFTNLILVQALR---------------QFLW 483
                 .|:|                  |..||:..:|.:.....|.               .:||
Mosquito   146 YYTSCSDLLKRERLVQPVPPPEPVNDKKRVVAILPYTKMPDTDELTFQKGDIFFVHNDMGDGWLW 210

  Fly   484 -SFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNT------DTCYVLSFAIIML-----NTSLHNP 536
             :....||...|      |.:....|:|.|..||      .|| ..:.|:.||     .:.|..|
Mosquito   211 VTAHRTGEQGMI------FRELVEDLDPAIDPNTVFPWFHPTC-TKNEAVDMLVKAGPGSFLVRP 268

  Fly   537 SVKDKPTVDQFISMNRGINNGGDLPRGL-----------LESLYESIRTEPFKIPQDDGNDLMHT 590
            |.........|..:|..|.......:|:           |:::....|.|...    :|:.|||.
Mosquito   269 SDNSPGDYSLFFHINNQIQRFRIEKKGVRYLMGGRTFECLDAVINRYRKEQIV----EGHTLMHP 329

  Fly   591 FFNPDK-------------------------------------EGWLWKQGGRYKSWKRRWFIL- 617
            ..|..:                                     .|:|.|:..:...||:.:|.| 
Mosquito   330 VINGSQPEYHPPTNLASAAEKIYATLRECRDQNMLKKTKGIKHHGYLLKKSDKTAKWKQLFFALL 394

  Fly   618 ---NDNCLYYFEYTTDKEPRGIIPLENISVREIHDR--SKPHCFELFATGGADIIKACKTDSEGK 677
               ::..|.:::.....:|:|:|.|....:.:.|:.  .:.|||::..                :
Mosquito   395 VEGSETHLCFYDSPKKTKPKGLIDLSCAYLYQCHESFWERQHCFQIVE----------------R 443

  Fly   678 VVEGKHTVYRMSAATEEDQQEWIKRLTQSISHNPFYDILVQRKKKALSK 726
            .:....|:..:.|..:|...|||..|.   ||      .|.:..||.||
Mosquito   444 ALPCLATITYLCANNQECYVEWISALK---SH------CVSQLSKAQSK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 51/253 (20%)
PH_GRP1-like 592..710 CDD:269954 25/160 (16%)
PH 596..708 CDD:278594 23/154 (15%)
AgaP_AGAP002729XP_312197.3 SH2 51..155 CDD:301589 23/110 (21%)
SH3_RasGAP 172..230 CDD:212722 11/63 (17%)
SH2_Cterm_RasGAP 241..315 CDD:198217 13/74 (18%)
PH_RASA1 368..473 CDD:270080 25/129 (19%)
PH 370..473 CDD:278594 25/127 (20%)
C2_Ras_p21A1 488..611 CDD:176045
RasGAP 594..947 CDD:214617
RasGAP 609..948 CDD:295371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.