DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and plekha2

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001121835.1 Gene:plekha2 / 100003662 ZFINID:ZDB-GENE-081105-163 Length:391 Species:Danio rerio


Alignment Length:370 Identity:75/370 - (20%)
Similarity:131/370 - (35%) Gaps:145/370 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 LDVPEDCKHSNKDKQMSIGRKKFNMDPKK---------------GIEYLVENRL----------L 423
            ||:.|   :.|.|:   ..|:.|.:|..|               |.|::...||          |
Zfish    14 LDIEE---NENSDR---FSRRYFILDTDKNYLLWYMDNPQNLPVGTEHVGSLRLSYISKVNEASL 72

  Fly   424 RHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLP 488
            :..|:  |.|.:....|::.    |..:.|| ..|:.:..:|:::.|.:.:.:            
Zfish    73 KQKPK--AEFCFVIHALSRR----YFLQAND-ALDLKEWVIAVNNATKITVPK------------ 118

  Fly   489 GEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPS---------------- 537
                         |...|| :.|:                  |::.|||                
Zfish   119 -------------ASPVCQ-SSDV------------------TNVSNPSQSAPRQAYTTAIVGGV 151

  Fly   538 -----VKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKE 597
                 |:...:.|.|::     :.|..:|....:|      ..|                |..:.
Zfish   152 VVQTPVQQNDSEDVFMA-----DPGAHVPLRRCQS------ARP----------------NALRS 189

  Fly   598 GWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFATG 662
            |:..|||...||||||:|||:|..:.|::...|||     ||.:|.:|::...::  |  |..:|
Zfish   190 GYCVKQGNVRKSWKRRFFILDDQTVSYYKSEMDKE-----PLRSIRLRDVLKVNE--C--LVKSG 245

  Fly   663 GADIIKACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSI 707
              |::   ..|:..:::....|.| :...|.||.:.||..:...|
Zfish   246 --DLL---SRDNLFEIITSARTFY-IQTDTPEDMKGWIMDIASKI 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 33/225 (15%)
PH_GRP1-like 592..710 CDD:269954 36/116 (31%)
PH 596..708 CDD:278594 35/112 (31%)
plekha2NP_001121835.1 PH-like 1..119 CDD:302622 24/142 (17%)
PH 11..113 CDD:278594 23/111 (21%)
PH2_TAPP1_2 179..294 CDD:270090 38/143 (27%)
PH 188..280 CDD:278594 34/106 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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