Protein Alignment Lamp1 and lamp1b

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001313461.1
• Gene: lamp1b / 563328
• ZFINID: ZDB-GENE-030131-9303
• Length: 253
• Species: Danio rerio
• Alignment Length: 266
• Identity: 69/266 - (25%)
• Similarity: 113/266 - (42%)
• Gaps: 62/266 - (23%)

  Fly    72 TSTITPRSTTPSTESPSTTAPVISTTIAPQPYPQPSIGAWN------TSCIMLQMAAQLNFTY-E 129
            ||.:...:.||.|.||.      ::.:.|.|   |..|.:|      |.|::.:||.|||.:: .
Zfish    29 TSNVPTTAATPETSSPP------ASPVTPGP---PERGNYNVTNANDTVCLLARMALQLNISFTS 84

  Fly   130 AREGNFTTGLYNIPSNASVEDAECKSQTTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFM---- 190
            ..:|.....:.|:..|.......|              |:.:.|||:  .:.|.|...||.
Zfish    85 TSQGKLVQEVLNLHPNLVKFSGSC--------------ESDRASLIL--TEDNITLTFSFSLNST 133

  Fly   191 --QIHLA--LLPEDFPD-AK----ENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQ 246
              :.||:  .|....|| ||    .|.|:..:..:.|       .||.|.:.:.:::|:...
Zfish   134 SNKYHLSGLELSASLPDMAKGLVVRNTTLNYLVGTLG-------HSYMCQKEKTLSVTQNFS--- 188

  Fly   247 LIGWISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRST 311
                ::...:||:.|....|  |....:|:..|...::||.||.|||.|:|:|:::||..|.||.
Zfish   189 ----LNTFQLQVQPFGVKGD--FGAAEECELDEDDMLIPIVVGAALAVLVLIVILAYLIGRNRSH 247

  Fly   312 SRGYMS 317
            : ||.:
Zfish   248 A-GYQT 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	38/175 (22%)
lamp1b	NP_001313461.1	Lamp	54..202	CDD:460152	39/177 (22%)