Protein Alignment Lamp1 and Lamp5

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001014205.1
• Gene: Lamp5 / 362220
• RGDID: 1306991
• Length: 280
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 47/206 - (22%)
• Similarity: 86/206 - (41%)
• Gaps: 19/206 - (9%)

  Fly   113 TSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVEDAECKSQ---TTQFIHLIWGPETSKQSL 174
            |:|:|.:.||:....|:....|:...:......:....||.|.:   ....:.:.|....  .:|
  Rat    55 TTCLMAEFAAKFIVPYDVWASNYVDLITEQAEISLTRGAEVKGRCGHNESELQVFWVDRA--YTL 117

  Fly   175 IMYFNKSNDTT--------VLSFMQ-IHLALLPEDFPDAKENQTVQLITRSDGAFKTPENMSYHC 230
            .|.|.|.:..|        .||.:| ::.:.....|.||.........:....|..||..|||.|
  Rat   118 KMLFVKESHNTSKGLEATWKLSKVQFVYDSSEKTHFKDAVSAGKHTANSHHLSALVTPAGMSYEC 182

  Fly   231 TRVQKINMTETLDAEQLIGWISVSHVQVEAFRRANDTGFSVGHDC---DSSETSDVVPIAVGIAL 292
            ...|.|::..: |.::.:..| :|.|.::.|...:|..||..|.|   :..:..:.:|:.:|:.|
  Rat   183 QAQQTISLASS-DPQKTVTMI-LSAVHIQPFDIISDFVFSEEHKCPVDEREQLEETLPLILGLIL 245

  Fly   293 AALILVVLISY 303
            ..:|::.|:.|
  Rat   246 GLVIVITLVIY 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	35/160 (22%)
Lamp5	NP_001014205.1	Lamp	43..213	CDD:480752	36/161 (22%)