Protein Alignment Lamp1 and Lamp3

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001012015.1
• Gene: Lamp3 / 303801
• RGDID: 1307928
• Length: 408
• Species: Rattus norvegicus
• Alignment Length: 325
• Identity: 76/325 - (23%)
• Similarity: 132/325 - (40%)
• Gaps: 74/325 - (22%)

  Fly    37 NVSDLFLEQANPLTSSSSTIST--SSTTTEKPI-TTRST----STITPRST-------------T 81
            :.|..|:...|...::|||..|  |.:.|..|. |||::    :.||.|||             |
  Rat   104 STSYTFVRTNNSHMTASSTEDTIGSGSITHLPFPTTRASLAAVNHITGRSTQLGGQTTLPKALFT 168

  Fly    82 PSTESPSTTAPVIST-------------TIAPQP-YPQPSIGAWNTS--------------CIML 118
            ||.||.:|..|.:||             |.:..| .|:|:...|::.              ||..
  Rat   169 PSHESTTTQRPTLSTIVSELTPTGKDRSTTSSVPLVPRPTFVTWSSPAKIGTYEVLNGSRLCIKA 233

  Fly   119 QMAAQLNFTYEAREGNFTTGLYNIPSNASVEDAECKSQTTQ-FIHLIWGPETSKQSLIMYFNKSN 182
            :|...| ...|....:.|...:||..:.:....:|.||.:. |::...|      |:.:.|.|..
  Rat   234 EMGIAL-IVQEKGLDSATQRHFNIDPSLTHASGKCGSQNSNLFLNFQGG------SVNVTFTKEE 291

  Fly   183 DTTVLSFMQIHLALLPEDFPDAKENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQL 247
            :...:|.:..:|.:  .:.....:.::..::      |:|....|:.|...|.|.::..|..:.:
  Rat   292 NLYYVSEVGAYLTI--SNTEKTYQGKSTMMM------FETVVGHSFKCVSEQSIQLSAQLQMKTM 348

  Fly   248 IGWISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRSTS 312
                   ::.::||....|: |.:..:|.|..|. |:|: |||.:..|.:|.|..|...:||.:|
  Rat   349 -------NIHLQAFDFEGDS-FGIVDECLSDYTV-VLPV-VGIIVVVLCVVGLGIYKIRQRRQSS 403

  Fly   313  312
              Rat   404  403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	28/170 (16%)
Lamp3	NP_001012015.1	Lamp	216..358	CDD:460152	27/163 (17%)