Protein Alignment Lamp1 and Cd68

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001026808.1
• Gene: Cd68 / 287435
• RGDID: 1305970
• Length: 330
• Species: Rattus norvegicus
• Alignment Length: 301
• Identity: 73/301 - (24%)
• Similarity: 126/301 - (41%)
• Gaps: 63/301 - (20%)

  Fly    48 PLTSSSSTISTS---STTTEKPITTRSTSTITP-RSTTPS----TESPSTTAPVISTTIAPQPYP 104
            |.|:|....:||   :||:.:|.||....|.|. |.||.|    |.||:|.:|..| |:.|.|.|
  Rat    53 PTTTSHRPTTTSHRPTTTSHRPTTTSHRPTTTSHRPTTTSHGNATVSPTTNSPGFS-TVGPHPGP 116

  Fly   105 QP--------SIGA-----WNTS---CIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVEDAEC 153
            .|        |.||     |...   |:.||...|:...|..:.|....||..:..|.:.....|
  Rat   117 PPPSPSPSPSSTGALGNYTWTNGSQPCVQLQAQIQIRILYLTQGGKKAWGLSVLNPNKTKVQGGC 181

  Fly   154 KSQ------TTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFMQIHLALLPEDFPDA------KE 206
            .|.      :..:..|.:|.:..:       ::|:.|..|::|.:...:   .||.|      .:
  Rat   182 DSAHPHLALSFPYGQLTFGFKQDR-------HQSHSTVYLNYMAVEYNV---SFPQAAQWTFSAQ 236

  Fly   207 NQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGWISVSHVQVEAFRRANDTGFSV 271
            |.::|       ..:.|...|:.|... .|.::..:..:.|       .::::|.:..:...|..
  Rat   237 NSSLQ-------ELQAPLGQSFCCGNT-SIVLSPAIHLDLL-------SLRLQAAQLPDKGHFGP 286

  Fly   272 GHDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRSTS 312
            ...| :|:.|.::|:.:|:.|..|:.:|||::...|||.::
  Rat   287 CFSC-ASDQSLLLPLIIGLVLLGLLTLVLIAFCVTRRRQST 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	33/183 (18%)
Cd68	NP_001026808.1	Lamp	132..279	CDD:460152	29/171 (17%)