Protein Alignment Lamp1 and Cd68

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001277987.1
• Gene: Cd68 / 12514
• MGIID: 88342
• Length: 326
• Species: Mus musculus
• Alignment Length: 300
• Identity: 72/300 - (24%)
• Similarity: 125/300 - (41%)
• Gaps: 55/300 - (18%)

  Fly    46 ANPLTS--------SSSTISTSS---TTTEKPITTRS--TSTITPRSTTPSTESPSTTAPVISTT 97
            |:|.||        .:.|:.|||   |.|..|.||.|  .:||:..:.:|:|...:|:..  |:|
Mouse    45 ASPTTSHRPTTTSHGNVTVHTSSGPTTVTHNPATTTSHGNATISHATVSPTTNGTATSPR--SST 107

  Fly    98 IAPQPYPQP------SIGA-----W---NTSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASV 148
            :.|.|.|.|      |.||     |   :..|:.||...|:...|..:.|....|:..:..|.:.
Mouse   108 VGPHPGPPPPSPSPRSKGALGNYTWANGSQPCVQLQAQIQIRILYPIQGGRKAWGISVLNPNKTK 172

  Fly   149 EDAECK------SQTTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFMQIHLALLPEDFPDAKEN 207
            ....|.      |.:..:..|.:|   .||.|    ::|..|..|.:|.:...:   .||.|.:
Mouse   173 VQGGCDGTHPHLSLSFPYGQLTFG---FKQDL----HQSPSTVYLDYMAVEYNV---SFPQAAQ- 226

  Fly   208 QTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGWISVSHVQVEAFRRANDTGFSVG 272
            .|......|....:.|...|:.|... .|.::..:..:.|       .::::|.:..:...|...
Mouse   227 WTFMAQNSSLRELQAPLGQSFCCGNA-SIVLSPAVHLDLL-------SLRLQAAQLPDKGHFGPC 283

  Fly   273 HDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRSTS 312
            ..|:..: |.::|:.:|:.|..|:.:|||::...|||.::
Mouse   284 FSCNRDQ-SLLLPLIIGLVLLGLLTLVLIAFCITRRRQST 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	35/175 (20%)
Cd68	NP_001277987.1	PHA03255	<35..>108	CDD:165513	20/64 (31%)
		Lamp	128..275	CDD:460152	31/165 (19%)