Protein Alignment Lamp1 and lamp3

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: XP_002936919.2
• Gene: lamp3 / 100497694
• XenbaseID: XB-GENE-954502
• Length: 314
• Species: Xenopus tropicalis
• Alignment Length: 347
• Identity: 80/347 - (23%)
• Similarity: 135/347 - (38%)
• Gaps: 90/347 - (25%)

  Fly    18 LLSSTVFSQKLIGLPRVGKNVSD-LFLEQAN---PLTSSSSTISTSSTTTEKPIT-----TRSTS 73
            |||:.:.   |.||..:....|: .|.:.:|   |..::::|..||:|||..|.|     |.:|:
 Frog     6 LLSTILL---LYGLLYINDAYSENTFAQPSNTTTPAPNTTTTHVTSNTTTLAPNTTTTHVTSNTT 67

  Fly    74 TITPRSTTPSTESPSTT-APVISTTIAP-----------------------QPYPQP------SI 108
            |:.|.:||....|.:|| ||..:||:||                       :|.|.|      ::
 Frog    68 TLAPNTTTTHITSNTTTLAPNTTTTLAPNTTTTHSVTTTKTASTTTPTPTLEPKPSPPETGNYTV 132

  Fly   109 GAWNTSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVEDAECKSQTTQFIHLIWGPETSKQS 173
            ...|..||...|..:|..|...:    |...:||..:....:..|              |.||.:
 Frog   133 KIKNEFCIEALMGLELELTNSTK----TQQYFNIVPSQINSNGTC--------------EKSKAN 179

  Fly   174 LIMYFNKSNDTTVLSFMQIHLALLPEDFPDAKENQTVQL-ITRSDGAF---------KTPENMSY 228
            |.:.|..|         .|:.....:|.....:|.||.. :|||:..:         ||....|.
 Frog   180 LNLTFANS---------YINFVFAQDDNSYYLDNVTVYFNLTRSESWYGNATNQKLLKTENGYSV 235

  Fly   229 HCTRVQKINMTETLDAEQLIGWISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALA 293
            .|....||.:.:|::       :.:::|:::.| ...|..|.....|.......:  :..||.:.
 Frog   236 KCKNTPKIQLGDTMN-------LVMTNVKLQVF-NFKDNSFGKETTCKYDHNFGL--MIAGIVIV 290

  Fly   294 ALILVVLISYLCARRRSTSRGY 315
            .::::.:|.|....:|.:| ||
 Frog   291 VIVVLGVIIYFIWHKRKSS-GY 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	33/171 (19%)
lamp3	XP_002936919.2	Lamp	125..264	CDD:480752	33/173 (19%)