Protein Alignment Lamp1 and lamp5

DIOPT Version :10

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001090781.1
• Gene: lamp5 / 100037871
• XenbaseID: XB-GENE-941198
• Length: 276
• Species: Xenopus tropicalis
• Alignment Length: 227
• Identity: 44/227 - (19%)
• Similarity: 90/227 - (39%)
• Gaps: 63/227 - (27%)

  Fly   113 TSCIMLQMAAQLNFTYEAREGN-----FTTGLYNIPSNASVEDAECKSQTTQFIHLIW------- 165
            |:|:|.:.:|::...||....|     .......:|.:..:. .:|.:..:: :||.|
 Frog    53 TTCLMAEFSARILVPYEVPSSNEVDWDLEEASIQLPRDTEIR-GKCWNNESE-LHLSWLDKAYTL 115

  Fly   166 -------GPETS-----KQSLIMYFNKSNDTTVL---------SFMQIHLALLPEDFPDAKENQT 209
                   |.:.|     |.|.|.:....::.|:.         :....||:|:
 Frog   116 KLFFSKEGQDASKSRSWKMSKIQFLYDPSEHTIFKSGARPGRHTANSHHLSLM------------ 168

  Fly   210 VQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGWISVSHVQVEAFRRANDTGFSVGHD 274
                       .||..|||.|...|:|::|.| |.:::: .:.:|.|.::.|...:|..:|..:.
 Frog   169 -----------VTPAGMSYECEATQRISLTST-DHQKIV-VLYLSEVHLQPFDIKSDFVYSEEYK 220

  Fly   275 CDS---SETSDVVPIAVGIALAALILVVLISY 303
            |.:   .:..:.:|:.:|:.|...||:::..|
 Frog   221 CPTDQRKQLEETLPLILGLTLGVAILIIVAVY 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	106..262	CDD:480752	34/181 (19%)
lamp5	NP_001090781.1	Lamp	41..210	CDD:480752	35/183 (19%)