DRSC/TRiP Functional Genomics Resources

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Protein Alignment dia and fhdc2

DIOPT Version :10

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:XP_009306082.1 Gene:fhdc2 / 569206 ZFINID:ZDB-GENE-091118-76 Length:916 Species:Danio rerio


Alignment Length:597 Identity:146/597 - (24%)
Similarity:234/597 - (39%) Gaps:143/597 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   546 PPPPPPPPMPGRAGGPPPPPPPPGMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKK 610
            |.||.|||       ||||||||   .|||....|:.|...|.                      
Zfish     7 PSPPIPPP-------PPPPPPPP---LPPPASASGLTRVDSGR---------------------- 39

  Fly   611 KWDVKNPMKRANWKAIVPAKMSDK-AFWVKCQEDKLAQDDFLAELAVKFSS-----------KP- 662
                |:.::..||:.|...::..: ..|    ...|.:|   :||.:..:|           || 
Zfish    40 ----KHRLRNLNWERIPKERIEGRNNVW----SGSLDED---SELTIDLNSLDELFGQKEGKKPE 93

  Fly   663 -----------VKKEQKDAVDKPTTLTKKNVDLRVLDSKTAQNLAIMLGGSLKHLSYEQIKICLL 716
                       .:..|:.::||.|          :||||.:.|:.|.|         .|:||..:
Zfish    94 RANGFRRSLLRCRSPQEISMDKVT----------LLDSKRSMNVGIFL---------RQLKIAAI 139

  Fly   717 RCDTDI-------LSSNILQQLIQYLPPPEHLKRLQEIKAKGEPLPPIEQFAATIGEIKRLSPRL 774
            ....|:       ..:..|.:|.:.||..|...|:::.......|...:.|...:.||.      
Zfish   140 EMVEDVRRGAAERYGAEKLAELCKLLPDNEEEARVKKFNGDRSLLAEPDLFILLLVEIP------ 198

  Fly   775 HNLNFKLTYADMVQDIKPDI----VAGTA---ACEEIRNSKKFSKILELILLLGNYMNSGSKNEA 832
             :...:|....:.|:..|.:    ||...   |..|:.:..:...||.|:|..|||||:|.....
Zfish   199 -SFRMRLDVMILQQEFDPAVTSLCVAARCLREAARELLSCPELHYILRLVLKAGNYMNAGGYAGN 262

  Fly   833 AFGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLSHVNKASRVNMDAIQKAMR 897
            |.||.||.|.||::||.......|||::|..|.||..|.|.|...||||:.|||::.:::.:...
Zfish   263 AAGFRISSLLKLADTKANKPGMNLLHFVAMEVVKKDKDLLMFSSRLSHVSPASRLSEESVVEDFS 327

  Fly   898 QMNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKMQLQMEKLYKD---LSEYY 959
            ::.|.|.:|....|       .|.:..:....|.::...:   |.:.|.::|.|.:.   |.|::
Zfish   328 RLQSRVADLRVRAQ-------ADAEIEQQTRTFLQDAEVR---LKEAQNELESLQQSSEALVEFF 382

  Fly   960 AFDPSKYTMEEFFADIKTFKDAFQAAHNDNVRVREELEKKRRLQEAREQSAREQQERQQRKKAVV 1024
            ..|...:.:||.......|...||.|..:|  ...||:::||:  |||   ||..|:::......
Zfish   383 CEDDKTFKLEEACHIFHCFCHRFQRAVQEN--TERELQEQRRV--ARE---RENVEKRRSLALCT 440

  Fly  1025 DMDAPQTQEGVMDSLLEALQ-TGSAFG------------QRNRQARRQRPAGAERRAQLSRSRSR 1076
            .::|.:..:.:..:|..:|. |||...            :||.::..|.|   :....|.||...
Zfish   441 GLEAERDSDDLEHALQRSLSYTGSRRSLRRLSQYFQRSEERNLKSDSQHP---DSNLHLERSSRD 502

  Fly  1077 TRVTNGQLMTRE 1088
            :.:....|...|
Zfish   503 SELKRHSLQKNE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:461886
Drf_FH3 253..453 CDD:461885
FH2 608..983 CDD:396655 97/415 (23%)
fhdc2XP_009306082.1 FH2 40..406 CDD:396655 97/408 (24%)
Smc <316..>522 CDD:440809 46/219 (21%)
Blue background indicates that the domain is not in the aligned region.

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