DRSC/TRiP Functional Genomics Resources

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Protein Alignment dia and fhdc4

DIOPT Version :10

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:XP_694558.2 Gene:fhdc4 / 566196 ZFINID:ZDB-GENE-131127-25 Length:752 Species:Danio rerio


Alignment Length:528 Identity:127/528 - (24%)
Similarity:225/528 - (42%) Gaps:86/528 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 PPPPPPPMPGRAGGPPPPPPPPGMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKK 611
            |||||||       ||||||||    |||||.|   .||||    ....||              
Zfish     3 PPPPPPP-------PPPPPPPP----PPPPPAP---FPGGG----QFTRGP-------------- 35

  Fly   612 WDVKNPMKRANWKAIVPAKMSDKA-FWVKCQEDKLAQDDFLAELAVKFSSKPVKKEQKDAVDKPT 675
             ...:.|:..||:.|....:..|. .|.:...:.......:.||..:...|.|:...:.::.:..
Zfish    36 -TRASTMRNFNWEPIPKNNVLGKTNIWTEKNREFELDTKRMEELFSRVDQKQVQNSNRRSIRQSP 99

  Fly   676 TLTKKNVDLRVLDSKTAQNLAIMLGGSLKHLSYEQIKICLLRCDTDILSS-------NILQQLIQ 733
            |....|..:.:|::|.:.|:.|.|         :|.:..:.....||::.       ..|:::.:
Zfish   100 TNAPGNEMVSILNAKKSMNIGIFL---------KQFRRSVNGMIEDIVNGRGDKFGPGKLKEMCK 155

  Fly   734 YLPPPEHLKRLQEIKAKGEPLPPIEQFAATIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGT 798
            .||....:::|::.|.....|...::|...:.::.....||:.|..|..:...:.::...|...|
Zfish   156 LLPEEGEVRQLRDFKGDPSVLSEADRFMVQLVKVPCYEERLNCLVLKEEFPHFMDEVSHAIAVMT 220

  Fly   799 AACEEIRNSKKFSKILELILLLGNYMNSGSKNEAAFGFEISYLTKLSNTKDADNKQTLLHYLADL 863
            :|..|:.:......::.|:|..|||||||....:|.||.|:.|.||::||.......|:||:...
Zfish   221 SAGRELLDCADLHSVIRLVLKTGNYMNSGGYAGSAVGFRITSLLKLADTKANKPGMNLMHYVVMQ 285

  Fly   864 VEKKFPDALNFYDDLSHVNKASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDDKFSEVMG 928
            .:|.....|.|.:.|.::..|:|::...|:...::..|.|       |.:|..........|.|.
Zfish   286 AQKIDAALLKFPEQLQNIGDAARIHKQEIETDFQKEISKV-------QKSKENASKQPDLEEQMR 343

  Fly   929 KFAEECRQQVDVLGKMQLQMEKLYKDLS-------EYYAFDPSKYTMEEFFADIKTFKDAFQAAH 986
            .|.:....::.       :||:.:|.||       :|:..||:::.:||..:...:|.:.|:.|.
Zfish   344 DFLQNAETRIQ-------EMEESFKMLSAVSDSVAQYFCEDPTQFKLEECCSIFYSFCEKFKRAV 401

  Fly   987 NDNVRVREELEKKRRLQEAREQSAREQQERQQRKKAVVDMDAPQTQEGVMDSLLEALQTGSAFGQ 1051
            .:|:. |:.||.|||.:|..:.:|:      :|..|.........:...::|:|:..        
Zfish   402 QENLD-RDILEVKRRQREGSQNAAK------RRSTATCSSRDKDIEGAALESILQRF-------- 451

  Fly  1052 RNRQARRQ 1059
            .:||:||:
Zfish   452 NSRQSRRR 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:461886
Drf_FH3 253..453 CDD:461885
FH2 608..983 CDD:396655 81/389 (21%)
fhdc4XP_694558.2 FH2 41..398 CDD:418645 81/379 (21%)
Blue background indicates that the domain is not in the aligned region.

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