DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG2617 and mgrn1a

Sequence 1:NP_001260636.1 Gene:CG2617 FlyBaseID:FBgn0032877 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001315473.1 Gene:mgrn1a ZFINID:ZDB-GENE-030131-6192 Length:554 Species:Danio rerio

Alignment Length:147 Identity:33/148 (22%)
Similarity:62/148 (42%) Gaps:32/148 (22%)


  Fly   136 VVHSIVAHGLSLLNSAFRASIGLALLLVLYMFRRYVYLMLIYLLQRGRIEISTKTQSVYLWTHHK 200
            ||.:||..|..:...|.         ::|..|.|:|         .|...:....|...:   .:
Zfish   200 VVQAIVDDGDDVTGHAH---------VLLAAFERHV---------DGSFSVKPLKQKQIV---DR 243

  Fly   201 LQHFIHNVWYV----------SENAGSASPERCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLL 255
            :.:.:..::.:          :|:..|.:...||||::..|:.:::||||||||..|: ..:...
Zfish   244 VSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNACA-DTLRYQ 307

  Fly   256 EDRCPVCRHNITSFLSV 272
            .:.||:||....:.|.:
Zfish   308 ANNCPICRLPFRALLQI 324

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG2617NP_001260636.1 zf-C3HC4_3 223..269 CDD:290631 18/46 (39%)
mgrn1aNP_001315473.1 PHA02929 <230..329 CDD:222944 22/100 (22%)
zf-C3HC4_3 275..317 CDD:290631 18/43 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG4265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR22996
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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