DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2617 and Cgrrf1

DIOPT Version :10

Sequence 1:NP_610050.1 Gene:CG2617 / 35331 FlyBaseID:FBgn0032877 Length:274 Species:Drosophila melanogaster
Sequence 2:XP_038948880.1 Gene:Cgrrf1 / 116679 RGDID:620803 Length:357 Species:Rattus norvegicus


Alignment Length:60 Identity:23/60 - (38%)
Similarity:29/60 - (48%) Gaps:14/60 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 ENAGSA---------SPERCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCR 263
            |.||.|         |.:.||||.....|.|::||||.|||..|     :....:||:||
  Rat   280 EKAGLAGAEVDPVEESSKDCVVCQNGGVNWVLLPCRHACLCDSC-----VCYFKQCPMCR 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2617NP_610050.1 zf-C3HC4_3 223..269 CDD:464042 18/41 (44%)
Cgrrf1XP_038948880.1 mRING-HC-C3HC5_CGRF1 297..334 CDD:438441 16/41 (39%)

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