DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pyroxd1 and Pyroxd1

DIOPT Version :10

Sequence 1:NP_610023.1 Gene:Pyroxd1 / 35296 FlyBaseID:FBgn0032846 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_001004234.1 Gene:Pyroxd1 / 297708 RGDID:1303253 Length:498 Species:Rattus norvegicus


Alignment Length:497 Identity:237/497 - (47%)
Similarity:310/497 - (62%) Gaps:39/497 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FLVVGGGIAGVSCAESLAIYRPNASILLLTESSIVKSVTNLVPVARYLHKFDVREQDVSEMGASF 71
            |:|||||||||:|||.|||..|...|||:|.|.::|:|||...|::.|.:|||.||..:.:...|
  Rat    10 FVVVGGGIAGVTCAEQLAINFPAEDILLVTASPVIKAVTNFKQVSKVLEEFDVEEQPSTMLENRF 74

  Fly    72 ---QTLVDRLDHINSREHCIRTKAGLEIKYRYLCLCTGGTPKLF-SGKVVNPLVIGIRDTDSVQL 132
               :.:...:..:.|.:|||.|:.|.|..|:.||||.|..|||. .|   ||.|:|||||||.|.
  Rat    75 PNIKVIESGVKQLKSDKHCIFTEDGREYVYKKLCLCAGAKPKLICEG---NPYVLGIRDTDSAQE 136

  Fly   133 LQRKLATAKDVLILGNGGIASELAYELKDVNVHWVVKDSHISATFVDPGAAEFFHIAMNECNAKD 197
            .|::|..|:.::|:||||||.|||||::...|.|.:||..|..||.|.|||||.   .:...::.
  Rat   137 FQKQLTKARRIMIVGNGGIALELAYEVEVCEVIWAIKDKAIGNTFFDAGAAEFL---TSRLLSEK 198

  Fly   198 SSPVVAIKRMRYSEVLPKEQTNNH------GAALGPDWHRSVDLSGAREGEEN-------RLPKI 249
            |...:|.||..|:....|::|:..      |:|||||||..:.|.|..|...:       .:.||
  Rat   199 SEAKLAHKRTIYTVEEAKKETSTKSKADYVGSALGPDWHGGLALKGTEEFSHSIHIETKCEVKKI 263

  Fly   250 YYKS--RISSVQDLA---DDAGAI--------VKLEHEDGSFQQLTCDFIVSATGVWPNTD-YTC 300
            |.:.  :|...:.||   |...::        |.:|..:||.  ..|||:||||||.||.. :..
  Rat   264 YLQEEFKIMKKKSLAFPKDHHKSVTVDKEMWPVYVELTNGSI--YGCDFLVSATGVTPNVQPFLH 326

  Fly   301 DSPLQFSDDGGISVDEMMRTNLVDVFAAGDVCTANWPAAMHWFQMRLWTQARQMGSMAGRSMAAA 365
            .:.....:|||:.|||.|||:|.|::||||:|||.||.:..|.||||||||||||..|.:.||||
  Rat   327 GNDFDLGEDGGLRVDEQMRTSLPDIYAAGDICTACWPPSPVWQQMRLWTQARQMGCYAAKCMAAA 391

  Fly   366 SEGESVYQDFCFELFGHVTKLFGYPVVLLGRFNGQDLGRDYEILVRCTRNKEYIKFVLQNGRLRG 430
            :.|..:..||.||||.||||.|.|.|||||::|.|.||.|:|:::||||.:||||.|:.|||:.|
  Rat   392 TMGHPIDMDFSFELFAHVTKFFNYKVVLLGKYNAQGLGVDHELMLRCTRGQEYIKVVMHNGRMMG 456

  Fly   431 AMLIGNTDLAETCENLILNGIDLEPYGDDILNPDIDIEDYFD 472
            |:|||.|||.||.||||||.:||..||:|:||||||||||||
  Rat   457 AVLIGETDLEETFENLILNQMDLSSYGEDLLNPDIDIEDYFD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pyroxd1NP_610023.1 NirB 7..469 CDD:440863 232/492 (47%)
Pyroxd1NP_001004234.1 NirB 84..495 CDD:440863 203/420 (48%)

Return to query results.
Submit another query.