DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and CIPK12

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_193605.1 Gene:CIPK12 / 827604 AraportID:AT4G18700 Length:489 Species:Arabidopsis thaliana


Alignment Length:288 Identity:102/288 - (35%)
Similarity:166/288 - (57%) Gaps:28/288 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 LPEE-------INKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIV-KKNMLSGARPSTNFSDP 222
            ||:|       |...|.:.:.||.|.:..|.|..:.:|.:..|:|:: |:.:|.|...:      
plant    11 LPKERSSPQALILGRYEMGKLLGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIA------ 69

  Fly   223 DRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQM 287
             .:..|..|::.:.||.:|::.:::.....:|.|:|::|||:|.|::...: |.|::::.||.|:
plant    70 -HIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGR-LKEEVARKYFQQL 132

  Fly   288 CHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKF---VQKDSVMRTLCGTPLYVAP 349
            ..||.:.|.||:.||||||:|:||   ||...|||||||||..   :::|.:..|.||||.||||
plant   133 ISAVTFCHARGVYHRDLKPENLLL---DENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAP 194

  Fly   350 EVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRA 414
            |||...|.:|  .||||||.||:||..::|.|||.|.......::|.:|.|..  |.|  .|...
plant   195 EVLARKGYDA--AKVDIWSCGVILFVLMAGYLPFHDRNVMAMYKKIYRGEFRC--PRW--FSTEL 253

  Fly   415 KLLINQMLIVDPERRPSIDDVLQSSWLR 442
            ..|::::|..:||:|.:..:::::||.:
plant   254 TRLLSKLLETNPEKRFTFPEIMENSWFK 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718
STKc_Chk2 167..441 CDD:270986 100/284 (35%)
CIPK12NP_193605.1 STKc_SnRK3 25..279 CDD:271133 96/270 (36%)
CIPK_C 342..453 CDD:213380
Blue background indicates that the domain is not in the aligned region.

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