DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and CIPK4

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_193194.1 Gene:CIPK4 / 827106 AraportID:AT4G14580 Length:426 Species:Arabidopsis thaliana


Alignment Length:319 Identity:109/319 - (34%)
Similarity:174/319 - (54%) Gaps:34/319 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PEEINKT-----YYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIV--KKNMLSGARPSTNFSDPDR 224
            ||:|..|     |.:.|:||||::..|.:.....|.:..|:||:  :|.:.||..|        |
plant     9 PEKITGTVLLGKYELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDSGMEP--------R 65

  Fly   225 VLNEAKIMKNL-SHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMC 288
            ::.|.:.|:.| :||.|:::|:::.....:|:|:|:..||:|..::|....|:|..::.||.|:.
plant    66 IIREIEAMRRLHNHPNVLKIHEVMATKSKIYLVVEYAAGGELFTKLIRFGRLNESAARRYFQQLA 130

  Fly   289 HAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQ---KDSVMRTLCGTPLYVAPE 350
            .|:.:.|..||.|||:||.|:||   |::..|||||||||...:   .:.::.|.||||.|.|||
plant   131 SALSFCHRDGIAHRDVKPQNLLL---DKQGNLKVSDFGLSALPEHRSNNGLLHTACGTPAYTAPE 192

  Fly   351 VLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAK 415
            |:...|.:.  .|.|.||.||.||..|:|.:||.|.......::|.|..:.:  |||  :|:.|:
plant   193 VIAQRGYDG--AKADAWSCGVFLFVLLAGYVPFDDANIVAMYRKIHKRDYRF--PSW--ISKPAR 251

  Fly   416 LLINQMLIVDPERRPSIDDVLQSSWLRDAPMLQKAKRLMKLDGMEIEEENFLEPPTKRS 474
            .:|.::|..:||.|.||:.|:.:.|      .||:..:.:......|.:.|||...|.|
plant   252 SIIYKLLDPNPETRMSIEAVMGTVW------FQKSLEISEFQSSVFELDRFLEKEAKSS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718
STKc_Chk2 167..441 CDD:270986 100/284 (35%)
CIPK4NP_193194.1 Protein Kinases, catalytic domain 20..276 CDD:473864 96/272 (35%)
CIPK_C 308..>376 CDD:213380
Blue background indicates that the domain is not in the aligned region.

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