DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and Camk1

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_598687.1 Gene:Camk1 / 52163 MGIID:1098535 Length:374 Species:Mus musculus


Alignment Length:283 Identity:109/283 - (38%)
Similarity:157/283 - (55%) Gaps:13/283 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EEINKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIM 232
            |:|...|.....||:||:..|.|..|.||.:..|:|.:.|..|.|...|..        ||..::
Mouse    14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--------NEIAVL 70

  Fly   233 KNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSE-DISKLYFYQMCHAVKYLHD 296
            ..:.||.:|.:.||.:....:|::::.:.||:|.:||:.....:| |.|:|.| |:..|||||||
Mouse    71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHD 134

  Fly   297 RGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGREAYT 361
            .||.||||||:|:|..:.||::.:.:|||||||.....||:.|.||||.|||||||   .::.|:
Mouse   135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL---AQKPYS 196

  Fly   362 KKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDP 426
            |.||.||:||:.:..|.|..||.||......:||.|..:.:..|.|..:|..||..|..::..||
Mouse   197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDP 261

  Fly   427 ERRPSIDDVLQSSWLRDAPMLQK 449
            |:|.:.:..||..|:.....|.|
Mouse   262 EKRFTCEQALQHPWIAGDTALDK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718
STKc_Chk2 167..441 CDD:270986 106/273 (39%)
Camk1NP_598687.1 STKc_CaMKI_alpha 16..278 CDD:271069 106/273 (39%)
Autoinhibitory domain. /evidence=ECO:0000250 276..316 2/9 (22%)
Calmodulin-binding. /evidence=ECO:0000250 296..317
Nuclear export signal. /evidence=ECO:0000250 315..321
Blue background indicates that the domain is not in the aligned region.

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