DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG10481 and VTC1

Sequence 1:NP_995731.1 Gene:CG10481 FlyBaseID:FBgn0032827 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_010995.1 Gene:VTC1 SGDID:S000000874 Length:129 Species:Saccharomyces cerevisiae

Alignment Length:92 Identity:22/93 (24%)
Similarity:36/93 (39%) Gaps:24/93 (26%)


  Fly   518 LMDFG--LFRVWNGENKFL-RDNLVYPRWFYYFVIVENTLLRCVWILEFALVHQELIAPYN---G 576
            |::||  :.||..|...|: ...::|....|:            |  ..|.:.:....||:   |
Yeast    50 LLNFGDKIGRVSAGLFTFVAMGTMIYALVTYH------------W--RAAAIRRRGSGPYDDRLG 100

  Fly   577 KSLICFSEIARRFFWNFLRLENEHLYN 603
            .:|:||..:........|||:    ||
Yeast   101 PTLLCFFLLVAVIINFILRLK----YN 123

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG10481NP_995731.1 SPX_XPR1_like 2..163 CDD:269898
SPX 3..163 CDD:281146
EXS 267..601 CDD:281164 20/89 (22%)
VTC1NP_010995.1 VTC1 1..124 CDD:227589 22/93 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C116277787
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.