DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10481 and PXo

DIOPT Version :10

Sequence 1:NP_995731.1 Gene:CG10481 / 35273 FlyBaseID:FBgn0032827 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster


Alignment Length:669 Identity:242/669 - (36%)
Similarity:354/669 - (52%) Gaps:55/669 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFGKTLDNLMVPEWRYQYMNYNELKQMIRNAVEKAPSGSRPSNDVAIGYYRNFEELFFNSCRVE 65
            |||.:.|...:.||||.||:||.|:|.|:..|:|::||......::...|:..|:|.||:.|..|
  Fly     1 MKFAEHLTAHITPEWRKQYINYEEMKAMLYAAIEQSPSAELVEREMVTRYFAKFDEEFFHYCDKE 65

  Fly    66 LTKVNYFFAHKQAEAHRKLATLNYQLDRRRAQQDPRGSTASRGSASSWSRQ-PEGKRKFP--PIK 127
            |.|:|.|::.|.|||.||..:|..:|........|:       ...:|.|: |.||:..|  .|:
  Fly    66 LAKINTFYSEKMAEATRKYGSLRSELTEALEMGHPK-------KLPAWKRRTPLGKKNVPARKIQ 123

  Fly   128 KLRLAMSEFYLSLIMLQNYQTLNMTAFRKICKKYDKNLKSEAGFAWYEKYVLKSTLAITLQLDRM 192
            .|:||.|||||.||:|||||.||.|.||||.||:||.|..:.|..|...:|..:.......:||:
  Fly   124 DLKLAFSEFYLGLILLQNYQNLNFTGFRKILKKHDKLLSVDYGARWRTDHVEAAHFYTNKDIDRL 188

  Fly   193 ISTTENMYTDYLANGDRSEAMAKLRVPPLGHPTPPVHVFSAGLFLGLFLVSAILCFISYFAVDTS 257
            |..||...|..:..|||..||.:|||||||....|...|..|||.|.|:|..|...|:.......
  Fly   189 IQETEQAVTQDIEGGDRQRAMKRLRVPPLGEQQSPWTTFKVGLFSGAFVVLFITVVIAAMFYGFG 253

  Fly   258 PEFRYTFVSLFRGPISGVTFGFCLAINIKVYETVGVNQVLIFEVERRNAIGAMRALEISSFFGYM 322
            ..:| ..:.:||.|...:...|...:|:..:.:.|||.|||||::.||.:.....:|::|.||.:
  Fly   254 ENWR-AGMRMFRAPFLIIECLFLWGVNVYGWRSSGVNHVLIFELDPRNHLSEQNIMEVASVFGVI 317

  Fly   323 CTLSILLYLLHKEFFIEDPIYI-----PLVQVAFVVVLFLNPFRILFYSGRIWLLTVMGRILLSP 382
            ....:|.|:..      ||:.|     ||.....:....|||.:...:..|.|.:.::.|::::|
  Fly   318 WACCVLSYIFC------DPLGIPQYAAPLCLYTLMAAFLLNPTKTFHHEARFWAIRILIRVIMAP 376

  Fly   383 FFFVNFADFWVADQWTSLVVTIVDHYYLVRFYVRYFLDRSDAFEFEPDYAVA------------- 434
            |.||||||||:|||..|:|...:|..:|:.|:.|           .|.:..|             
  Fly   377 FCFVNFADFWLADQLNSMVPAFLDIPFLICFFGR-----------SPTWHKAGKAASHCVEYVSL 430

  Fly   435 ---VIRCLPAWFRFAQSLRRFRDSGSKSTDYLINALKYFLFIAEVVFSTIQMETIAHYTDLFESP 496
               ::..:||:|||||.:||:||: .:|..:|:||.||......|:|:.....|...|....|:|
  Fly   431 LHPIVAIMPAYFRFAQCIRRYRDT-KESFPHLVNAAKYATSFFVVIFAHKYHTTTDTYPLSKENP 494

  Fly   497 WTWAYITICIVSSIYTVFWDLLMDFGLFRVWNGENKFLRDNLVY-PRWFYYFVIVENTLLRCVWI 560
            |.:.:||..|.||.|...||:.||:|||....|:|:|||:.:|| ..|||||.|:|:.:||..|.
  Fly   495 WFYCWITAAIFSSCYAYTWDIKMDWGLFDSKAGDNRFLREEIVYSSTWFYYFGIIEDLILRFSWT 559

  Fly   561 LEFALVHQELIAPYNGKSLICFSEIARRFFWNFLRLENEHLYNCGQFRATRDIFITRLDPQEERF 625
            |..:|:....|......:::...|:.|||.||:.|||||||.|.|:|||.|||.:..:|..::..
  Fly   560 LSMSLIEAGYIEGDVMMTILSPLEVFRRFIWNYFRLENEHLNNVGKFRAVRDISVAPMDCSDQTT 624

  Fly   626 LESVMDNTEDLGREKLNKK 644
            :..:||.|:.:    ||::
  Fly   625 ILRMMDETDGV----LNRR 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10481NP_995731.1 SPX_XPR1_like 2..163 CDD:269898 69/163 (42%)
EXS 267..601 CDD:460816 121/355 (34%)
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898 69/163 (42%)
EXS 260..600 CDD:460816 121/357 (34%)

Return to query results.
Submit another query.