DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10166 and ATCSLA15

DIOPT Version :8

Sequence 1:NP_609980.1 Gene:CG10166 / 35240 FlyBaseID:FBgn0032799 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_193077.2 Gene:ATCSLA15 / 826972 AraportID:AT4G13410 Length:537 Species:Arabidopsis thaliana

Alignment Length:214 Identity:44/215 (20%)
Similarity:71/215 (33%) Gaps:104/215 (48%)


  Fly     5 GHK-YSILM---PTYNEKDNLPIII-------W----LIVKYMKASGLEYEVIVIDDGSPDGTLD 54
            ||: |.:::   |.|||::...:.|       |    |||:            |:||.:....::
plant   106 GHQNYPMVLVQIPMYNEREVFELSIGAACRLTWPSDRLIVQ------------VLDDSTDPAIME 158

  Fly    55 V---------AKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHA---TGDFIVIIDADLSHHPK 107
            :         :||:...|...:   ...|.|.|   |..||::|:   ...::.|.|||....|.
plant   159 LVSMECTKWASKDININYERRE---NRNGYKAG---ALKHGMRHSYVKQCQYLAIFDADFQPEPD 217

  Fly   108 FI----------PE-----------------------------FIKLQQEGNYDIVSGTRYA--- 130
            ::          ||                             |:..||.|:      ||:|   
plant   218 YLQRAIPFLIHNPEVALVQARWRFVNANTCLMTRMQEMSLNYHFMAEQQSGS------TRHAFFG 276

  Fly   131 --GNGGVF---------GW 138
              |..||:         ||
plant   277 FNGTAGVWRMVAMEEAGGW 295

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG10166NP_609980.1 PLN02726 3..241 CDD:215385 44/215 (20%)
DPM1_like 10..237 CDD:133062 41/209 (20%)
ATCSLA15NP_193077.2 CESA_CaSu_A2 111..347 CDD:133059 41/210 (20%)
Glyco_tranf_2_3 111..346 CDD:290369 41/210 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.667 Consistency score
10.910

Return to query results.
Submit another query.