Protein Alignment: swm and AT3G27700

• Sequence 1: NP_001260586.1
• Gene: swm
• FlyBaseID: FBgn0002044
• Length: 1063
• Species: Drosophila melanogaster
• Sequence 2: NP_189407.2
• Gene: AT3G27700
• AraportID: AT3G27700
• Length: 908
• Species: Arabidopsis thaliana
• Alignment Length: 1040
• Identity: 229/1041 (22%)
• Similarity: 365/1041 (35%)
• Gaps: 373/1041 (36%)

  Fly   226 ADKENQPRDSRRRRASLRSRSRSRS---RSNERAFRRSRSRDRRVNEREKTQRQFRNKSPPGSQT 287
            :::|:..|:.:.||   :..:||:|   .|:::||    ||..|     |..|.:.|    |:..
plant    29 SEEEDDDRNHKHRR---KEETRSQSLEQDSSDQAF----SRPYR-----KNYRHYEN----GNSF 77

  Fly   288 DNRHHGRRNFDRRRIGGNADDRPRFGNNKSRRS--HSRSMSP-----------ERNARRN----- 334
            .  .|.:|:|     |..:..|.:|.|.:.|.:  .||...|           :|::|.|
plant    78 S--EHEKRSF-----GTGSGQRVQFDNQRMRSNPMFSRDSGPGRGRGNYGSWAQRDSRFNPVDLS 135

  Fly   335 -------------------------QNSP---------------DRVQTAQANLIPAPVAPPAPV 359
                                     |::|               |.....|.:|.|       |:
plant   136 SHMVQVGSMGQGMFGGRGLAGVSAAQSAPWPPFGMIPGVPNGGLDGFHHLQGSLRP-------PL 193

  Fly   360 EHPASH--PRQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSLMMSMREYN-----PDAPE 417
            ..|.:.  ||||||||:|:|:|:||:.||.:||:|.:|.:.:      .|:.::|     |.||.
plant   194 NAPLNMGIPRQRCRDFEERGFCLRGDMCPMEHGMNRIVVDDV------QSLSQFNLPVSVPGAPH 252

  Fly   418 IWARS-------GGP----PPGA--------------GQGPVPP---------PTQP------GQ 442
            :.|.|       ||.    |.||              |.|...|         |.||      |:
plant   253 LAASSKQVPAQFGGASFMNPKGAHGRTNEGGMAVDGLGYGDAYPSAGGTDFYDPDQPLWNNSTGE 317

  Fly   443 T-----TINP--FSGNVRP------TTLMSGSGPSPMGVPNPADYARNPGAPPQA-------AMM 487
            |     |:|.  ...||.|      ....:|.|.......:.:.:.|..|:..||       |::
plant   318 TSGAISTLNSHGVDENVAPLDDSNQDAAENGCGIRDSRSTSQSVWGRMKGSNSQANSKEKADAVL 382

  Fly   488 PFPFNPTAVTTPLQRQLIPIPVVDGAPTGGVAEVGKRRFELEDTVAIADVPTKRKVPINSRLGPR 552
                |.:||.   :.||..:.|       ..:..||:....|....:.|         :|.:.
plant   383 ----NSSAVP---EDQLKEVSV-------NSSRHGKQNHVGESVAKVVD---------SSNIS-- 422

  Fly   553 VNPNMQQHNSSLELRKVPRGL--NTIAHLNN-------HFAKFGKIVNIQVSYEGDPEAAIVTFS 608
               |...:|:....:|..|.|  |.:.|.:|       ||.||||:::|.:..  :.|.|.|.||
plant   423 ---NDMMNNTRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPV--NSERAFVQFS 482

  Fly   609 THAEANVAYRSTEAVLNNRFIKVFWHNDSSGADVGQMNQMGGGGGGGGRKNASQYHLHNVPAVPT 673
            ...||..|.|:.:||:.|||||::|.|..|..|.|...     |.|...|..|.
plant   483 KREEAESALRAPDAVMGNRFIKLWWANRDSIPDNGLST-----GSGASMKGRSM----------- 531

  Fly   674 PNADGAKISNANPLTEAGAGNIGTPATEQANTAAPASMRLKLNTTTAGGSAGGAAGAGAPGSG-- 736
             .|.||:  |..|:..|...|             ..|...|:.|...|         |||.|.
plant   532 -TASGAQ--NQFPIAAASKSN-------------HVSSIAKVPTFQTG---------GAPSSSEQ 571

  Fly   737 -RPLNPAANAASIRKKQEEQQKAVHQLANGLRKRKQELLQSYMKQMKTALELVERMDQQDPQRAP 800
             :|:....:...:...|:::...:.:|...||| |||:|:....:.:..|..:|:
plant   572 PKPVVVTTSGPKVTPLQQKKADTLERLKETLRK-KQEMLEQKRNEYRKKLATLEK---------- 625

  Fly   801 TLQTIKVLQMTIDKLRKEIKADQDQLQAQMQQQQQQQQPPVKKTKEQQKKELLDMELELIAQQQE 865
                                      |..:.::::..:|..|:.|       ||...:..|....
plant   626 --------------------------QGTVVKREEADEPDAKRVK-------LDTASDSGAAIAS 657

  Fly   866 GNDTTAIQKRLEELQRNLGVGSAANNKSTHYAPASGAPGGGAGRKRP-------NLP-EGPTRVD 922
            ....::..|::..|:      ..:..|.:...|   :|.....::||       |.| ....::|
plant   658 PKTESSTDKKVPILK------PLSTAKLSTETP---SPDSKNFKQRPYSFTTSLNAPMVNRYKLD 713

  Fly   923 RRPKAIVV-----TGFAAEEADFVLGHFKNFGEISK--------------HDVDREIPQLILSYA 968
            .|...|.|     ||.|  :...|..||.::||:||              |:...|.....:::.
plant   714 NRTTTIKVVPPLPTGLA--DVAVVKEHFSSYGEVSKVELEDNASIDSGKDHETQNESRAACVTFV 776

  Fly   969 TRLNAEQAVLRGKMYKDKRLQISW-------------------------------APVVTPAPAP 1002
            .|..||:|....|.:::..||:.|                               ...|:..|.|
plant   777 KRSAAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRDNLSSKNKCASVSNDPKP 841

  Fly  1003 MAAPVEKSAA--PGDMSVSLENPKQL-IQSVSES---------ESLLGSDTLPELRLEDEEEDEE 1055
             |..|:.|:.  |.:.:||.:|...| .|...||         ||:.|:..:......|||:.|:
plant   842 -AVEVKTSSTEEPENTNVSGDNDSTLDKQETKESDNDNNKSNHESIEGASEVIATAGTDEEQSEQ 905

  Fly  1056  1055
            plant   906  905

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
swm	NP_001260586.1	RRM1_RBM26_like	561..634	CDD:240703	31/82 (38%)
		RRM2_RBM26_like	921..992	CDD:240704	23/90 (26%)
AT3G27700	NP_189407.2	ZnF_C3H1	<206..227	CDD:214632	13/21 (62%)
		RRM	365..>493	CDD:223796	39/158 (25%)
		RRM1_RBM26_like	437..508	CDD:240703	29/73 (40%)
		RRM_SF	712..800	CDD:302621	23/90 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	93	1.000	Inparanoid score	I2178
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000				T192512
orthoMCL	1	0.900				OOG5_129444
Panther	1	1.100			LDO	PTHR14398
Phylome	1	0.910		0.923	Consistency score
	5	4.960