Sequence 1: | NP_001260586.1 | Gene: | swm / 35235 | FlyBaseID: | FBgn0002044 | Length: | 1063 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002662309.4 | Gene: | rbm26 / 619195 | ZFINID: | ZDB-GENE-050706-50 | Length: | 1007 | Species: | Danio rerio |
Alignment Length: | 1210 | Identity: | 344/1210 - (28%) |
---|---|---|---|
Similarity: | 511/1210 - (42%) | Gaps: | 350/1210 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
Fly 66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
Fly 131 IKPDSNQVKLEQASQDAREAEALAFISQEAGIAMHVPTDAKPAFDQHKTKDSHNQQSASNYQHHH 195
Fly 196 VRSASPPGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASLRSRSRSRSRSNERAFRRS 260
Fly 261 RSRDRRVNEREKTQRQFRNKSPPGSQTDNRHHGRRNFDRRRIGGNADDRPRFGNNKSRRSHSRSM 325
Fly 326 SPERNARRNQNSPDRVQTAQANLIPAP----------------VAPPAPVEH-----------PA 363
Fly 364 SH--------PRQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSLMMSMREYNPDAPEIWA 420
Fly 421 RSGGPPPGAG------------QGPVPPP-TQPGQTTINPFSG---------------------N 451
Fly 452 VRPTTLMSGSGPSPMGVPNPADYARNPGAP----PQAAMMPFPFNPTAVTTPLQR--------QL 504
Fly 505 IPIPV--VDGAPTGGVAEVGKRRFELEDT-----VAIADVPTKRKVPINSRLGPRVN-PNMQQH- 560
Fly 561 ----------NSSLELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAEANV 615
Fly 616 AYRSTEAVLNNRFIKVFWHNDSSGADVGQMNQMGGGGGGGGRKNASQYHLH----------NVPA 670
Fly 671 V--------------PTPNADGAKISNANPLTEAGAGNIGTPATEQANTAAPASMRLKLNTTTAG 721
Fly 722 --GSAGGAAGAGAPGSGRPLNPAANAASIRKKQEEQQKAVHQLANGLRKRKQELLQSYMKQMKTA 784
Fly 785 LELVER---MDQQDPQRAPTLQTIKVLQMTIDKLRKEIK--ADQDQLQAQMQQQQQQQQPPVKKT 844
Fly 845 KEQQKKELLDMELELIAQQQEGNDTTAI-----QKRLEELQRNL-----GVGSAANNKSTHYAPA 899
Fly 900 SGAPGGGAGRKRPNLPEGPTR--VDRRPKAIVVTGFAAEEADFV--LGHFKNFGEISKHDVDREI 960
Fly 961 PQLILSYATRLNAEQAVLRGKMYKDKRLQISW-APVVT-PAPAPMAAPVEKSAAPGDMSVSLENP 1023
Fly 1024 KQLIQSVSESESLLGSDTLPELRLEDEEEDEESEDRSWRR 1063 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
swm | NP_001260586.1 | RRM1_RBM26_like | 561..634 | CDD:240703 | 40/72 (56%) |
RRM2_RBM26_like | 921..992 | CDD:240704 | 27/72 (38%) | ||
rbm26 | XP_002662309.4 | PWI | 7..72 | CDD:295364 | 41/64 (64%) |
ZnF_C3H1 | <302..322 | CDD:214632 | 13/19 (68%) | ||
RRM | 453..740 | CDD:223796 | 83/322 (26%) | ||
RRM_SF | 537..612 | CDD:302621 | 42/74 (57%) | ||
DUF3508 | <731..>853 | CDD:288841 | 43/139 (31%) | ||
RRM2_RBM26_like | 886..957 | CDD:240704 | 27/72 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580491 | |
Domainoid | 1 | 1.000 | 93 | 1.000 | Domainoid score | I7509 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 357 | 1.000 | Inparanoid score | I2193 |
OMA | 1 | 1.010 | - | - | QHG48662 | |
OrthoDB | 1 | 1.010 | - | - | D324834at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002919 | |
OrthoInspector | 1 | 1.000 | - | - | otm26519 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106329 | |
Panther | 1 | 1.100 | - | - | O | PTHR14398 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1927 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.910 |