Sequence 1: | NP_001260586.1 | Gene: | swm / 35235 | FlyBaseID: | FBgn0002044 | Length: | 1063 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935312.3 | Gene: | rbm27 / 100498053 | XenbaseID: | XB-GENE-6037527 | Length: | 1007 | Species: | Xenopus tropicalis |
Alignment Length: | 1199 | Identity: | 335/1199 - (27%) |
---|---|---|---|
Similarity: | 511/1199 - (42%) | Gaps: | 328/1199 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
Fly 66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
Fly 131 IKPDSNQVKLEQASQDAREAEALAFISQEAGIAMHVPTDAK-PAFDQHKTKDSHNQQSASNYQHH 194
Fly 195 HVRSASPPGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASLRSRSRSRSRSNERAFRR 259
Fly 260 SRSRDRRVNEREKTQRQFRNKSPPGSQTDNRHHGRRNFDRRRIGGNADDRPRFGNNKSRRSHSRS 324
Fly 325 MSPERNARRNQNSPDRVQTAQANLIPAPVAPPAPVEHPAS-----------H-----------PR 367
Fly 368 QRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSLMMSMREYNPDAPEIWARSGGPPPGAGQG 432
Fly 433 PVPPPT-QPGQTTINPFSGNVRPTTLMSGSGPSP-MGVPNPAD-YARNP---------GAPPQAA 485
Fly 486 MMPFP---------------FNPTAVT----------TPLQRQLIPIPVVDGAPTGGVAEVGKRR 525
Fly 526 FELEDTVAIADVPTKRKVP-----------INSRL--------------GP---------RVNPN 556
Fly 557 ---------MQQHNSSLELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAE 612
Fly 613 ANVAYRSTEAVLNNRFIKVFWHNDSSGADVGQMNQ------------MGGGGGGGGRK------N 659
Fly 660 ASQYHLHNVPAVPTPNADGAKISNANPLTEAGAGNIGTPATEQANTAAPASMRLKLNTTTAGGSA 724
Fly 725 GGAAGAGAPGSGRPLNPAANA---ASIRKKQEEQQKAVHQLANGLRKRKQELLQSYMKQMKTALE 786
Fly 787 LVERMDQ----QDPQRAPTLQTIKVLQMTIDKLRKEIKADQDQLQAQMQQQQQQQQPPVKKTKEQ 847
Fly 848 QKKELLDMELELIAQQQEGNDTTAIQKRLEELQ---RNLGVGSAANNKSTHYAPASGAPGGGAGR 909
Fly 910 KRPNLPEGPTR-----VDRRPKAIVVTGFAAEEADFVLGHFKNFGEISKHDVDREIPQLILSYAT 969
Fly 970 RLNAEQAVLRGKMYKDKRLQISWAPVVTPAPAPMAAPVEKSAAPGDMSVSLENPKQLIQSVSESE 1034
Fly 1035 SLLGSDTLPELRLEDEEEDEESEDRSWRR 1063 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
swm | NP_001260586.1 | RRM1_RBM26_like | 561..634 | CDD:240703 | 43/72 (60%) |
RRM2_RBM26_like | 921..992 | CDD:240704 | 27/70 (39%) | ||
rbm27 | XP_002935312.3 | PWI | 7..72 | CDD:413375 | 40/64 (63%) |
zf-CCCH | 292..314 | CDD:395517 | 12/21 (57%) | ||
RRM_RBM27 | 541..616 | CDD:409939 | 45/74 (61%) | ||
SbcC | <731..>854 | CDD:223496 | 41/144 (28%) | ||
RRM_SF | 889..960 | CDD:418427 | 27/70 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48662 | |
OrthoDB | 1 | 1.010 | - | - | D324834at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR14398 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3653 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.060 |