Sequence 1: | NP_001260586.1 | Gene: | swm / 35235 | FlyBaseID: | FBgn0002044 | Length: | 1063 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005167991.1 | Gene: | rbm27 / 100332262 | ZFINID: | ZDB-GENE-110411-31 | Length: | 1031 | Species: | Danio rerio |
Alignment Length: | 1231 | Identity: | 344/1231 - (27%) |
---|---|---|---|
Similarity: | 496/1231 - (40%) | Gaps: | 368/1231 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
Fly 66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
Fly 131 IKPDSNQVKLEQASQDAREAEALAFISQEAGIAMHVPTDA-----------KPAFDQHKTKDSHN 184
Fly 185 QQSASNYQ-HHHVRSASPPGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASLRSRSRS 248
Fly 249 RSRSNERAFRRSRSRDRRVNEREKTQRQFRNKSPPGSQTDNRHHGRRNFDRRRIGGNADDRPRFG 313
Fly 314 NNKSRRSHSRSMSPERNARRNQNSPDRVQTAQANLIPAPV-----------APP------APVEH 361
Fly 362 PAS-----------HP-----------RQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSL 404
Fly 405 M----------MSMREYNPDAPEIWARSGGPPPGAGQGPVPPPTQPGQTTINPFSGN------VR 453
Fly 454 PTTLMSGSGP-------------------SPMGVPNPADYARNPGAP--------------PQAA 485
Fly 486 MMPFPFNPTA-------VTTP-----------LQRQ---LIPIPVVDG------------APTGG 517
Fly 518 VAEVGKRRFELEDTVAIADVPTKRKVPINSRLGPRV------NPNM-QQH-----------NSSL 564
Fly 565 ELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAEANVAYRSTEAVLNNRFI 629
Fly 630 KVFWHNDSSGADVGQMNQMGGGGGGGGRKNASQYH--LHNVPAVPTPNADGAKISNANPLTEAGA 692
Fly 693 GNIG-TPATEQANTAAPASMRLKLNTTTAGGSAGGAAGAGAPGSGRPLNPAANAASIRKKQEEQQ 756
Fly 757 KAVHQLANGLRKRKQELLQSYMKQMKTALELVERMDQQDP-QRAPTLQTIKVLQMTIDKLRKEIK 820
Fly 821 ADQDQLQAQMQQQQQQQQPPVKKTKEQQKKELLDMELELIAQQQEGNDTTAIQKRLEELQ---RN 882
Fly 883 LGVGSAANNKSTHYAPASGAPGGGAGRKRPNLPEGPTR---VDRRPKAIVVTGFAAEEADFVLGH 944
Fly 945 FKNFGEIS---KHDVDREIPQLILSYATRLNAEQAVLRGKMYKDKRLQISW----APVVTPAPAP 1002
Fly 1003 MAAPVEKSAAPGDMSVSLENPKQLIQSVSESESLLGSDTLPELRLEDEEEDEESEDRSWRR 1063 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
swm | NP_001260586.1 | RRM1_RBM26_like | 561..634 | CDD:240703 | 43/72 (60%) |
RRM2_RBM26_like | 921..992 | CDD:240704 | 27/73 (37%) | ||
rbm27 | XP_005167991.1 | PWI | 7..72 | CDD:295364 | 39/64 (61%) |
zf-CCCH | 288..309 | CDD:279036 | 14/20 (70%) | ||
RRM | <500..>673 | CDD:223796 | 68/189 (36%) | ||
RRM_SF | 559..634 | CDD:302621 | 45/74 (61%) | ||
DUF4200 | 736..809 | CDD:290574 | 23/76 (30%) | ||
RRM_SF | 902..972 | CDD:302621 | 27/73 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580492 | |
Domainoid | 1 | 1.000 | 157 | 1.000 | Domainoid score | I4124 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2135 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 357 | 1.000 | Inparanoid score | I2193 |
OMA | 1 | 1.010 | - | - | QHG48662 | |
OrthoDB | 1 | 1.010 | - | - | D324834at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002919 | |
OrthoInspector | 1 | 1.000 | - | - | otm26519 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR14398 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3653 |
SonicParanoid | 1 | 1.000 | - | - | X1927 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.900 |