Protein Alignment: swm and rbm27

• Sequence 1: NP_001260586.1
• Gene: swm
• FlyBaseID: FBgn0002044
• Length: 1063
• Species: Drosophila melanogaster
• Sequence 2: XP_005167991.1
• Gene: rbm27
• ZFINID: ZDB-GENE-110411-31
• Length: 1031
• Species: Danio rerio
• Alignment Length: 1231
• Identity: 344/1232 (28%)
• Similarity: 496/1232 (40%)
• Gaps: 368/1232 (30%)

  Fly     1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
            ||::|.|.||.||:.:|||:||||.||||.||:||:||||.:|:|:.:..:||||||.:|||.||
Zfish     1 MIIDNVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELRALCADQLDVFLQKETTGFV 65

  Fly    66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
            ::||:.:.::.||..||               |.:|:.:.:.
Zfish    66 DKLFECLTTKNYLGPPA---------------VKEEVKIPVQ----------------------- 92

  Fly   131 IKPDSNQVKLEQASQDAREAEALAFISQEAGIAMHVPTDA-----------KPAFDQHKTKDSHN 184
                    |||:..:.|                 ||..|.           :..|::.:.:|...
Zfish    93 --------KLEEKEETA-----------------HVEDDRENRRRRSPLRNRSDFNESRARDDRR 132

  Fly   185 QQSASNYQ-HHHVRSASPPGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASLRSRSRS 248
            :......: ..|::|    |.|                   |.|:.      .||..|.|.||.|
Zfish   133 RDDRKRREVDRHLKS----GES-------------------YRDRH------ERRGGSSRGRSYS 168

  Fly   249 RSRSNERAFRRSRSRDRRVNEREKTQRQFRNKSPPGSQTDNRHHGRRNFDRRRIGGNADDRPRFG 313
            ||||..|:..|.:||:|..|:|                   |...|..|::.|
Zfish   169 RSRSRSRSGSRGKSREREHNQR-------------------RAEHRSKFEQER------------ 202

  Fly   314 NNKSRRSHSRSMSPERNARRNQNSPDRVQTAQANLIPAPV-----------APP------APVEH 361
                     :...|...:..:.::|...||....|:|.|:           |.|      |||..
Zfish   203 ---------KEAEPYNPSSAHMSNPHHQQTHPPPLLPLPLPQHQFPSSGSPAVPKAATVVAPVHL 258

  Fly   362 PAS-----------HP-----------RQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSL 404
            |.|           |.           :.||||:||||:|:||:.||:|||.:|::.:.:...::
Zfish   259 PDSTTESWSAYFTNHSDGKTFNKSNTLKHRCRDYDEKGFCIRGDLCPFDHGNDPLIVDDVTLPTM 323

  Fly   405 M----------MSMREYNPDAPEIWARSGGPPPGAGQGPVPPPTQPGQTTINPFSGN------VR 453
            :          |.|    |...|       ||||... |:||..||....|.|....      .|
Zfish   324 IPFPPPPALPRMPM----PPMTE-------PPPGMPM-PLPPHGQPPPPGIYPMPAGGPPAILSR 376

  Fly   454 PTTLMSGSGP-------------------SPMGVPNPADYARNPGAP--------------PQAA 485
            ||..:..:||                   ||:.:|.... ..||..|              ||..
Zfish   377 PTGGLLPTGPPLIPATGIDTPPHSRTTTSSPLALPGVGP-PPNPPPPLPPSSSSSSSASLHPQYT 440

  Fly   486 MMPFPFNPTA-------VTTP-----------LQRQ---LIPIPVVDG------------APTGG 517
            :..:.::|.|       :|.|           :|.|   ||.:...||            .|:..
Zfish   441 LSEYNYDPEAYNPESPGLTGPGRAQYRHFIPRIQTQRPNLIGLTSGDGLNSRAANIVIQTEPSVT 505

  Fly   518 VAEVGKRRFELEDTVAIADVPTKRKVPINSRLGPRV------NPNM-QQH-----------NSSL 564
            .....:.||..|.        ..||..:.|..||:|      .||. .||           |:.|
Zfish   506 SVSNSEMRFNSEQ--------ENRKRCLPSTDGPQVKKPWMDKPNFNNQHKPTFPKKHYYVNTKL 562

  Fly   565 ELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAEANVAYRSTEAVLNNRFI 629
            |:|::||.||.|..||.||:|||.||||||.:.||||||::.::.:.||..|..|||||||||||
Zfish   563 EVRRIPRELNNITKLNEHFSKFGTIVNIQVVFGGDPEAALIQYTANDEARRAISSTEAVLNNRFI 627

  Fly   630 KVFWHNDSSGADVGQMNQMGGGGGGGGRKNASQYH--LHNVPAVPTPNADGAKISNANPLTEAGA 692
            :|:||.:.:.....|        |.....|..|.|  .|.|.....|.|... ::...|...|..
Zfish   628 RVYWHREPTANTQEQ--------GPSQSTNPGQQHPPTHKVINKQHPAASYV-LNKTIPKHHAAT 683

  Fly   693 GNIG-TPATEQANTAAPASMRLKLNTTTAGGSAGGAAGAGAPGSGRPLNPAANAASIRKKQEEQQ 756
            |..| |.:||..:.:...|:.|...::...|.........|..|......|..|....||::|..
Zfish   684 GTAGITGSTEPTSPSQEPSVGLTPPSSLVKGPFSRTVLKAASKSLGKTGKALEAQEALKKKQEAL 748

  Fly   757 KAVHQLANGLRKRKQELLQSYMKQMKTALELVERMDQQDP-QRAPTLQTIKVLQMTIDKLRKEIK 820
            |    |...:||:|||:|:..::..|..:..:|:.....| :||..::|:|.|...|.:|:.||.
Zfish   749 K----LQQDMRKKKQEMLEKQIECQKVLINRLEKNRGMKPEERANIMKTLKELTEKISQLKNEIS 809

  Fly   821 ADQDQLQAQMQQQQQQQQPPVKKTKEQQKKELLDMELELIAQQQEGNDTTAIQKRLEELQ---RN 882
            .     .||......|     .|:|...:|||||.||:...:...|.|||.:::||.:||   ..
Zfish   810 P-----TAQATANTTQ-----SKSKTDAQKELLDAELDFHKKLTSGEDTTDLKRRLGQLQVEATR 864

  Fly   883 LGVGSAANNKSTHYAPASGAPGGGAGRKRPNLPEGPTR---VDRRPKAIVVTGFAAEEADFVLGH 944
            ||:..|...|.: .||..|.   |.||.|.....|...   ||.||:|:.:.||..||.:.::.|
Zfish   865 LGLIPAGRGKPS-LAPTRGR---GRGRGRNLRGRGGANHMVVDHRPRALSIIGFTQEEKEELMPH 925

  Fly   945 FKNFGEIS---KHDVDREIPQLILSYATRLNAEQAVLRGKMYKDKRLQISW----APVVTPAPAP 1002
            |..||||.   :||..    .:::::.||.:||.|..:|..:|.:.|||||    .|.|:..|..
Zfish   926 FVKFGEIEELREHDAS----SVVMTFKTRSDAENAANQGAKFKGRILQISWYKPKTPSVSTEPEE 986

  Fly  1003 MAAPVEKSAAPGDMSVSLENPKQLIQSVSESESLLGSDTLPELRLEDEEEDEESEDRSWRR 1063
            ..:..|.:||.             |..::|..|..   .|||...||::||:|.|.|||||
Zfish   987 EESKEEVNAAG-------------IHVMTEPVSPF---LLPEEEEEDDDEDDEYESRSWRR 1031

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
swm	NP_001260586.1	RRM1_RBM26_like	561..634	CDD:240703	44/73 (60%)
		RRM2_RBM26_like	921..992	CDD:240704	28/74 (38%)
rbm27	XP_005167991.1	PWI	7..72	CDD:295364	39/65 (60%)
		zf-CCCH	288..309	CDD:279036	15/21 (71%)
		RRM	<500..>673	CDD:223796	68/190 (36%)
		RRM_SF	559..634	CDD:302621	45/75 (60%)
		DUF4200	736..809	CDD:290574	24/77 (31%)
		RRM_SF	902..972	CDD:302621	28/74 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C334652326
eggNOG	1	0.900				E1_KOG2135
Hieranoid	1	1.000
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	353	1.000	Inparanoid score	I2187
OMA	1	1.010
OrthoDB	1	1.010				D324834at33208
OrthoFinder	1	1.000				FOG0002051
OrthoInspector	1	1.000				T597499
orthoMCL	1	0.900				OOG5_129444
Panther	1	1.100			LDO	PTHR14398
Phylome	1	0.910		0.667	Consistency score
RoundUp	1	1.030		avgDist	Average_Evolutionary_Distance	R3653
TreeFam	1	0.960
ZFIN	0	0.000	Not matched by this tool.
	13	12.800