Protein Alignment brat and Rnf208

DIOPT Version :10

• Sequence 1: NP_001188842.2
• Gene: brat / 35197
• FlyBaseID: FBgn0010300
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_001424717.1
• Gene: Rnf208 / 499748
• RGDID: 1565957
• Length: 265
• Species: Rattus norvegicus
• Alignment Length: 259
• Identity: 50/259 - (19%)
• Similarity: 72/259 - (27%)
• Gaps: 91/259 - (35%)

  Fly     2 ASSPTPSLDSMRGGANSIESYEHAGYLSDSPLTLSGSS--PPASDSAICSDEYTGGSSVKSRSEV 64
            |..|||:|...|...:..|...:.....|.| ||.|:|  ||............|...|....||
  Rat    54 APRPTPTLAPKRAWPSDTEIIVNQACGGDMP-TLEGASHTPPLPRRPRKGSSELGFPRVAPVDEV 117

  Fly    65 TVINGH--HPISASVSSSSSASSSSCSSSSSSSSSSSSSSSSTSGLSGCGSTSSSVISANNVASS 127
             ::|.:  .|                                       |.|:|:       .||
  Rat   118 -IVNQYVIRP---------------------------------------GPTASA-------PSS 135

  Fly   128 NGPGVIGSNLQSSNNGGNSGISSLVVGAGKGSNSSSNSSSSNTSANGSPPRCTAC-KSKCSDAVA 191
            :||.:.|..|:....|....::.                        ..||..:| .|.|...:.
  Rat   136 SGPVIAGEPLECPTCGHTYNVTQ------------------------RRPRVLSCLHSVCEQCLQ 176

  Fly   192 KCFE-CQSYLCANCVTAHEFMHCFNGHNVCLIKGFEASTTGT-------PLSVGSPSNNPASNE 247
            ..:| |..|...:|.|.|.....|..:      |..|....|       |.::.:||......|
  Rat   177 ILYESCPKYKFISCPTCHRETVLFTDY------GLAALAVNTSILSRLPPEALTAPSGGQWGGE 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
brat	NP_001188842.2	Bbox1_BRAT-like	178..222	CDD:380871	11/45 (24%)
		Bbox2_BRAT-like	326..366	CDD:380856
		CC_brat-like	382..503	CDD:467844
		NHL_brat_like	760..1030	CDD:271329
		NHL repeat	783..819	CDD:271329
		NHL repeat	830..871	CDD:271329
		NHL repeat	874..910	CDD:271329
		NHL repeat	914..954	CDD:271329
		NHL repeat	959..997	CDD:271329
		NHL repeat	1002..1027	CDD:271329
Rnf208	NP_001424717.1	None