DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brat and wech

DIOPT Version :10

Sequence 1:NP_001188842.2 Gene:brat / 35197 FlyBaseID:FBgn0010300 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_314006.5 Gene:wech / 1274803 VectorBaseID:AGAMI1_005942 Length:875 Species:Anopheles gambiae


Alignment Length:1135 Identity:250/1135 - (22%)
Similarity:397/1135 - (34%) Gaps:393/1135 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASSPTPSLDSMRGGAN--------SIESYEHAGYLS--------DSPLTLSGSSP---PASDSAI 47
            |||...:..:..||.|        ...|.:|..:.|        |:|...| |.|   |.|::..
Mosquito     8 ASSMQITPQTANGGPNGGGPDGPGDFNSNDHIFFSSLFNALPCWDAPHKAS-SGPVMVPQSNNNT 71

  Fly    48 CSDEYTGGSSVKSRSEVTVINGHHPISASVSSSSSASSSSCSSSSSSSSSSSSSSSSTSGLSGCG 112
            ..|.    .|:....::        :.::|..:....|||..||.:....:.....|:.|.||.|
Mosquito    72 SLDR----DSISITEDI--------LFSNVLGAIGTGSSSSGSSGAIGMGNVGIIGSSHGSSGGG 124

  Fly   113 STSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGKGSNSSSNSSSSNTSANGSPP 177
            ..:.:|.|||.:.     |||||:..|.        :.|..|....:| |||.|...:|......
Mosquito   125 HLAHAVTSANEIF-----GVIGSSCASH--------AQLTPGTSPQTN-SSNGSHCPSSVGAICG 175

  Fly   178 RCTACKSKCSDAVAKCFECQSYLCANCVTAH---EFM--HCFNGHNV--------CLIKGFEAST 229
            ||.      :.|.::|.:|...||.:|...|   .|.  ||....|.        |::.|     
Mosquito   176 RCD------THASSRCLDCNDVLCEDCTQLHGKNAFTKDHCVISINTISPIGSAPCMVPG----- 229

  Fly   230 TGTPLSVGS-PSNNPASNEFKYASSLTMMLQQQQQLDSQQQQQQQQLLPAQPMSQLSKIVLAAAA 293
            .|.....|| |||.|                                             :||  
Mosquito   230 NGHGSGNGSGPSNGP---------------------------------------------MAA-- 247

  Fly   294 QANSQEQQREDSIYGSLHPQQQQQQQQQQQRQLFCPRHKQELLKFSCRTCCILVCKECIVLEHST 358
                          |...|.              |..| .|:|::.|.:|..:||:||.:.:|. 
Mosquito   248 --------------GLSEPH--------------CDVH-GEVLRYLCESCKKVVCQECTLWDHK- 282

  Fly   359 GLHELENVQSPGMTTSTGSTANESALQTLLADMRGKIGEIVGIAGNSDQNLT---KVKLQYQKAH 420
                 ::...|....|.|  |:|..:..|.:   ||:|... |..:.|:.:|   .|:....:|.
Mosquito   283 -----DHSCIPVANISHG--ASEKIMSILES---GKLGTKY-IKASIDRAVTYSQAVERDAMEAS 336

  Fly   421 NELNETHQFFASMLDERKTELLKELETLYTAKVNSNNSWQQRSRDLIDKGLATCEAVERSPAPPS 485
            ..:.:..:.|....::|:..||..::...          ||:...|.|: :|...|.....:..|
Mosquito   337 ARIRKAMRHFILAAEDRERTLLDRVDKFR----------QQKLTSLSDQ-MAGLRAALAGLSQTS 390

  Fly   486 SLLTEAL---LLRKSLE--QQLQTGIQEMQLPFEIEFMSNYQSIQ-------------------- 525
            .:||:||   .:..|:|  :.|.||..:|:     :|.:.|:::|                    
Mosquito   391 DMLTKALDSVSVMGSMEIAKTLTTGESQME-----QFAAMYKNLQPKEEFITFVAPNFELLQEIR 450

  Fly   526 -------AGVRNTFGYIRANSSDG----GPTGMSL----TSNGHG------------KQPPIARP 563
                   .|.|:  ..:.:|||..    ||||.:.    .|||.|            .:.||.| 
Mosquito   451 MQGDVMLVGQRS--NSVSSNSSGNASLQGPTGPNCGGVNPSNGVGGVGVVGSVGNILTRRPIVR- 512

  Fly   564 TQSASNSSASSAGSGHHGHHQQSHHHGHHNHHQTAHHQQLQAQSSLHGLGLGLSGASLLDSSSSA 628
                |.:.|...||                             ||...:|.|.||:|.:..||..
Mosquito   513 ----STTPAQRIGS-----------------------------SSWEPMGKGSSGSSSVLGSSPT 544

  Fly   629 GGAVGAFSNGGLLLGGRDRNALAVEQHFGELMPKRGGGGYTGSNG--SATSAVAHYNPYEKWSNG 691
            ...:|......:|               |:.:|        |.|.  :|..||.           
Mosquito   545 SFGIGPIPGAPIL---------------GQCIP--------GCNNHVAAKPAVG----------- 575

  Fly   692 GSDNLFSSVTSGVSGSSAVADAFASLSAVGGSVVSGAGAGGSTVSSESLLDLTNKLLSATIYPPK 756
                  .|:|.|..|..            .|.|   :...|.||      |...::|.|.....:
Mosquito   576 ------PSLTFGFDGHE------------DGQV---SRPWGITV------DKDGQILVADRRNNR 613

  Fly   757 SQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG 821
            .||......:..|||..|...|||..|:|:..:.|..|||.|.:|||:|:|...|.|..:||..|
Mosquito   614 VQIFYPDGTFKLKFGSKGTANGQFDLPAGICTDGQGRIIVVDKDNHRVQVFSAGGLFLLKFGSYG 678

  Fly   822 KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQH---------PRGV 877
            |...|..||..|| |...|:|:||: |..|:||:::..|.|:.::....:.|         |||.
Mosquito   679 KECGQFQYPWDVA-VNTKGEILVTD-SRNHRIQLFSPDGLFISRYSFDGVNHSRYLKGLTTPRGA 741

  Fly   878 TVDNKGRIIVVECKVMRVIIFD-----------QNGNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 931
            ....:|.||:.:.:..|:::.|           ..|:.:|:|      ..|:|:..:|...:.::
Mosquito   742 CFTPQGDIIISDFENHRLLLIDATLSKVLAAKGHEGSAVHEF------SRPSGICCDDDGRVIVA 800

  Fly   932 DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALE 996
            |::...|.||:.:.::|          :.:.:..:|||.:.|                    .::
Mosquito   801 DSKNQRVLVFSPQLEFL----------WAVEIRPSSNGLLAI--------------------GMD 835

  Fly   997 SKVKHAQCFDVALMDDGSVVL---ASKDYR 1023
            .|.:.:   ||||:.||.:|:   .|.|.|
Mosquito   836 EKDRPS---DVALLPDGRLVVMVETSPDAR 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bratNP_001188842.2 Bbox1_BRAT-like 178..222 CDD:380871 14/56 (25%)
Bbox2_BRAT-like 326..366 CDD:380856 11/39 (28%)
CC_brat-like 382..503 CDD:467844 26/128 (20%)
NHL_brat_like 760..1030 CDD:271329 76/287 (26%)
NHL repeat 783..819 CDD:271329 15/35 (43%)
NHL repeat 830..871 CDD:271329 14/40 (35%)
NHL repeat 874..910 CDD:271329 11/46 (24%)
NHL repeat 914..954 CDD:271329 8/39 (21%)
NHL repeat 959..997 CDD:271329 4/37 (11%)
NHL repeat 1002..1027 CDD:271329 10/25 (40%)
wechXP_314006.5 None

Return to query results.
Submit another query.