DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and gad2

DIOPT Version :10

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001017708.2 Gene:gad2 / 550403 ZFINID:ZDB-GENE-030909-9 Length:583 Species:Danio rerio


Alignment Length:519 Identity:131/519 - (25%)
Similarity:210/519 - (40%) Gaps:83/519 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PEFKDFAKTM------VDFIAEYL-ENI-RERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDI 95
            |.....||||      ||.:..|: |:. |..:|:....|..|.........::||...|::...
Zfish    97 PALDGDAKTMNFLQEVVDILLAYIVESFDRSTKVIDFHYPNELLQRNNWELSDEPETLDDILISC 161

  Fly    96 ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKM 160
            ...:...:...| |::.....|......:.||.|:.......||:..:|....||.|.   |.||
Zfish   162 RATLKYAIKTAH-PRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEVAPVFVLLEYVT---LKKM 222

  Fly   161 LELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQ 225
            .|:    :....|.|.|:.....:.|.:.|:|.|:.|...||||     ...:.:.:||.:.|:.
Zfish   223 REI----IGWQDGHGDGIFSPGGAISNMYAMLLARYKMFPEVKE-----KGMSSVPRLVAFTSEH 278

  Fly   226 AHSSVERAGLLGGVKLRSV----QSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFD 286
            :|.|:::.....|:...||    ..|..:|..:.||:.|.:...:|.:||:...|.|||...|||
Zfish   279 SHFSIKKGAAALGIGTESVICIKADERGKMIPSDLERRIIEAKQKGYVPFFVSATAGTTVYGAFD 343

  Fly   287 YLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLK 351
            .|.....:..||::|:|||.|:.||..:..::|..:.|:|.|:|..:||||.|.|...|||:.::
Zfish   344 PLIAIADICKKHDVWMHVDGAWGGSLLMSRKHRWKLNGVERANSMTWNPHKMMAVPLQCSALLVR 408

  Fly   352 DPSWVVNAFNVDPLYL----KH-DMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIR 411
            :...:.:...:...||    || |:|....|.   .:..||.....|||.:.|..|....:|.|.
Zfish   409 EEGLMQSCNQMQACYLFQQDKHYDLQYDTGDK---ALQCGRHVDIFKLWLMWRAKGTIGFEAQID 470

  Fly   412 RHCNFAKQF--------GDLCVADSRFELAAEINMGLVCF--------RLKGSNERNEALLKRIN 460
            :....::..        |...|.|.:   ....|   |||        .|:...||    :||  
Zfish   471 KCLELSEYLYNKIKDREGYQMVFDGK---PQHTN---VCFWYLPPGVRYLEDKVER----MKR-- 523

  Fly   461 GRGHIHLVPAKIK------------------DVYFLRMAICSRFTQSEDMEYSWKEVSAAADEM 506
                :|.|...||                  .|.|.||.|.:.....||:::..:|:.....::
Zfish   524 ----LHKVAPVIKARMMEYGTTMVSYQPQGDKVNFFRMVISNPAATFEDIDFLIEEIERLGQDL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:395219 103/400 (26%)
gad2NP_001017708.2 PHA00540 102..>156 CDD:133910 14/53 (26%)
Pyridoxal_deC 136..506 CDD:395219 103/391 (26%)
TIM-like beta/alpha barrel domains 511..>561 CDD:473867 14/59 (24%)

Return to query results.
Submit another query.