DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddc and gad3

DIOPT Version :10

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001083039.2 Gene:gad3 / 100038790 ZFINID:ZDB-GENE-070424-80 Length:546 Species:Danio rerio


Alignment Length:512 Identity:122/512 - (23%)
Similarity:205/512 - (40%) Gaps:92/512 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KDFAKTMVDFIAEYLENIRERRV----------LPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIE 96
            |.|.:.:|:.:..|:....:|..          |.|...|:...|     |::|:..:.::.|..
Zfish    66 KHFLQELVNILLAYISKSLKRSTKVLDFHYPHQLNEGLEGFSLEL-----PDQPDNLEQLLVDCR 125

  Fly    97 RVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKML 161
            ..:..||...| |:|.....|......:..:.|:.......||:..||....:|.|::..:..::
Zfish   126 DTLKYGVKTGH-PRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEISPVFILMEEVVLRKMHTII 189

  Fly   162 ELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTI--LGKLVGYCSD 224
            ..|.|       .|.|:.....|.|.|.::|.|:.       .|.|....|.:  :.:|..:.|.
Zfish   190 GWPEE-------DGDGIFCPGGSMSNLYSVLLARF-------HLFPAVKTHGMCAIPRLAMFTSA 240

  Fly   225 QAHSSVERAGLLGGVKLRSV----QSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAF 285
            .:|.|::::..:.|:...:|    ..|..:|..:.|..:||:..::||:|||...|.|||...||
Zfish   241 HSHYSIKKSAAVLGIGTENVIVVRCDERGKMISSELNSSIEEAKSKGLVPFYVNATAGTTVYGAF 305

  Fly   286 DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWL 350
            |.|.:...:...|.||:|||||:.|...:..::|..:.|||.|.|..:||||.|.|...||.:.:
Zfish   306 DPLHKIADICEHHGLWMHVDAAWGGGLLLSNKHRVKLHGIERAHSVTWNPHKMMGVPLQCSTILV 370

  Fly   351 KDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQ---------IPLGRRFRALKLWFVLRLYGVENL 406
            |....:.....:...||      ..|| :|::         |..||.....|||.:.:..|.|..
Zfish   371 KRKGLLQQCNQLCAEYL------FQPD-KHYEVSYDTGDKSIQCGRHVDIFKLWLMWKAKGSEGF 428

  Fly   407 QAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEA----LLKRING------ 461
            ::.: .||....::       ..::|....:..||   .||..|.:..    |.||:..      
Zfish   429 ESQV-NHCLENAEY-------LYYKLKRRTDFQLV---FKGKPEHSNVCFWYLPKRVQNIPLGPE 482

  Fly   462 -RGHIHLVPAKIK------------------DVYFLRMAICSRFTQSEDMEYSWKEV 499
             ...:|:|..|||                  .|.|.|....:..||.||:::...|:
Zfish   483 REKELHMVAPKIKTKMMEEGFTMIGYQPLEDKVNFFRCVFSNPATQREDVDFLLDEI 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:395219 96/390 (25%)
gad3NP_001083039.2 Pyridoxal_deC 96..469 CDD:395219 101/410 (25%)

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