DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10700 and Sqor

DIOPT Version :10

Sequence 1:NP_609942.1 Gene:CG10700 / 35183 FlyBaseID:FBgn0032754 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_067482.4 Gene:Sqor / 59010 MGIID:1929899 Length:450 Species:Mus musculus


Alignment Length:320 Identity:73/320 - (22%)
Similarity:127/320 - (39%) Gaps:50/320 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ACRNWQDQRHFVVVGGGPSGAVCVETLRQEGFTGRLTLV-CGEKHLPYDRTRIMNLLNTYTKNLA 187
            ||...::....:|:|||..|......:::......:.:| ..|:|. |.  .|..|:....|.|:
Mouse    36 ACCTAKNHYEVLVLGGGAGGITMATRMKRRVGAENVAIVEPSERHF-YQ--PIWTLVGAGAKELS 97

  Fly   188 L--REEQFYKDYGIE-MQLGVSAERLDTNCNTLHCTNGKTFPYDKIYIATGYSAVTPNIPGV--- 246
            |  |........|:: :|..|:....|.||  :...:||...|..:.||.|.......|.|:   
Mouse    98 LSVRSTLSVIPSGVQWIQDRVAELNPDENC--IRTDSGKEISYRYLIIALGIQLDYEKIKGLPEG 160

  Fly   247 ----------HLKNV----KVIRNIGDARSIFKMVDKSTQVVCLGSSFMAVEATANLVSRA--RS 295
                      .:|.|    |.::...:..::|..  .:|.|.|.|:....:     .:|.|  |.
Mouse   161 FAYPKIGSNYSVKTVEKTWKALQGFKEGNALFTF--PNTPVKCAGAPQKIM-----YLSEAYFRK 218

  Fly   296 VTLVARQNVPFKSTLGELIGQR-----ILKLLEENKVDLRMSSGIIRILGNSRGEVVAVKLLDNS 355
            .....:.|:.|.:.||.:.|.:     :.:::.|..|.:.....:|.:..:.:..|  .::||..
Mouse   219 TGKRPKANIIFNTALGTIFGVKKYADALQEIIRERDVSVNYKHNLIEVRPDKQEAV--FEILDKP 281

  Fly   356 R----IPCNLLILGTGCQCNTDFLQRSGININPNGSVDVN-DFLQ-TKVRNVYVGGDIAN 409
            .    ||..:|.: |......|.|:||.: .:..|.|||: :.|| .|..||:..||..|
Mouse   282 GETHVIPYEMLHV-TPPMSAPDVLKRSPV-ADSAGWVDVDKETLQHKKYPNVFGIGDCTN 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10700NP_609942.1 Rieske_AIFL_N 10..106 CDD:239560
NirB 131..519 CDD:440863 71/313 (23%)
SqorNP_067482.4 FadH2 71..389 CDD:440215 66/285 (23%)
Blue background indicates that the domain is not in the aligned region.

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