DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10700 and sqor

DIOPT Version :10

Sequence 1:NP_609942.1 Gene:CG10700 / 35183 FlyBaseID:FBgn0032754 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001017881.1 Gene:sqor / 550580 ZFINID:ZDB-GENE-050417-436 Length:445 Species:Danio rerio


Alignment Length:331 Identity:68/331 - (20%)
Similarity:118/331 - (35%) Gaps:82/331 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 QDQRHFVVVGGGPSG-AVCVETLRQEGFTGRLTLVCGEKHLPYDRTRIMNLLNTYTKNLAL--RE 190
            :|....:|:|||..| |:.....|:.|......:...|.|. |.  .|..|:....|::|.  |.
Zfish    35 KDHYKVLVLGGGSGGIAMAARLKRKVGAENVAIVEPSEMHY-YQ--PIWTLVGAGAKSVASSGRS 96

  Fly   191 EQFYKDYGIEMQLGVSAERLDTNCNTLHCTNGKTFPYDKIYIATGYSAVTPNIPGV-----HLK- 249
            .......|:.......|| .|...||:|...||...||.:.:|.|.......|.|:     |.| 
Zfish    97 TSSVIPSGVTWVKSKVAE-FDLEKNTVHTDCGKKISYDYLIVALGLELHYEKIKGLPEGFEHPKI 160

  Fly   250 ----NVKVIRNIGDARSIFK-----MVDKSTQVVCLGS---------SFMAVEATANLVSRARSV 296
                ::|.:....||...||     ....:|.|.|.|:         :|:            |..
Zfish   161 GSNYSLKTVEKTWDALKSFKEGNALFTFPNTPVKCAGAPQKIMYLSDAFL------------RKT 213

  Fly   297 TLVARQNVPFKSTLGELIGQR-----ILKLLEENKVDLRMSSGIIRILGNSRGEVVAVKLLDNSR 356
            ...::.|:.|.::|..|.|.:     :.:::::..:::.:...:|.:..:.:..|     .:|..
Zfish   214 GKRSKANIIFNTSLPVLFGVKKYADALWEIVKKRDLNVNLRHNLIEVRADKQEAV-----FENLD 273

  Fly   357 IPCNLLILGTGCQCNTDFLQRSGININP----------------NGSVDVN-DFLQTKV-RNVYV 403
            .|           ..|:..:...:::.|                .|.:||| :.||.|. .||:.
Zfish   274 KP-----------GETEVFKYEMLHVTPPMGPPAVLKGSLLDDAGGWLDVNKNTLQHKTYDNVFG 327

  Fly   404 GGDIAN 409
            .||..|
Zfish   328 IGDCTN 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10700NP_609942.1 Rieske_AIFL_N 10..106 CDD:239560
NirB 131..519 CDD:440863 67/329 (20%)
sqorNP_001017881.1 FadH2 65..339 CDD:440215 59/301 (20%)
Blue background indicates that the domain is not in the aligned region.

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