DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swip-1 and efhd2

DIOPT Version :10

Sequence 1:NP_609925.1 Gene:Swip-1 / 35158 FlyBaseID:FBgn0032731 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001313422.1 Gene:efhd2 / 571114 ZFINID:ZDB-GENE-060531-152 Length:233 Species:Danio rerio


Alignment Length:201 Identity:114/201 - (56%)
Similarity:144/201 - (71%) Gaps:4/201 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DSPSSTTNTDSSELTHILNRRQEIMESQEAGIEVRRTYKVVNVYTDFPEFSRNQIKDYQKTFNTY 81
            |.|  ||::..|||...|.||.|:.|.  .|...:.:.||.|.||:|.||||.||||.:|.|..|
Zfish    37 DKP--TTSSADSELGAKLQRRGELNEG--VGEHQQPSMKVFNPYTEFKEFSRKQIKDMEKMFKQY 97

  Fly    82 DTARDGFLDLQELKFMMEKLGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFRKAQAGELDSDS 146
            |:.:|.::||.|||.|||||||||||||||.||.|||||.|||:||||||||||||.||||..||
Zfish    98 DSEKDNYIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDLDGKLSFREFLLIFRKAAAGELAEDS 162

  Fly   147 GLNQLARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEEERAQRRQQFQQ 211
            ||:.||||:|:||...||.|||:|||||::....:|:|..|||.||||::::.||:.||:..|::
Zfish   163 GLHVLARLSEIDVSTEGVKGAKSFFEAKVQAINESNRFEAEIRLEQEEKKKQAEEKKQRQAAFKE 227

  Fly   212 RAAIFQ 217
            ..:.|:
Zfish   228 LKSAFK 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Swip-1NP_609925.1 EFh 73..131 CDD:238008 40/57 (70%)
efhd2NP_001313422.1 EFh 89..147 CDD:238008 40/57 (70%)

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