DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swip-1 and Efhd2

DIOPT Version :10

Sequence 1:NP_609925.1 Gene:Swip-1 / 35158 FlyBaseID:FBgn0032731 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001026818.1 Gene:Efhd2 / 298609 RGDID:1307585 Length:239 Species:Rattus norvegicus


Alignment Length:212 Identity:112/212 - (52%)
Similarity:148/212 - (69%) Gaps:2/212 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NASSASNKDSVDSPSSTTNTDSSELTHILNRRQEIMESQEAGIEVRRTYKVVNVYTDFPEFSRNQ 70
            |.::|:..::.|..:....:...||:..|.||.::  :|..|.....:.:|.|.||:|.||||.|
  Rat    30 NGAAAAAAEAPDETAQALGSADDELSAKLLRRADL--NQGIGEPQSPSRRVFNPYTEFKEFSRKQ 92

  Fly    71 IKDYQKTFNTYDTARDGFLDLQELKFMMEKLGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFR 135
            |||.:|.|..||..:|||:||.|||.|||||||||||||||.||.|||||.|.|:||||||||||
  Rat    93 IKDMEKMFKQYDAGKDGFIDLMELKLMMEKLGAPQTHLGLKSMIQEVDEDFDSKLSFREFLLIFR 157

  Fly   136 KAQAGELDSDSGLNQLARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEE 200
            ||.||||..||||:.||||:|:||...||.|||||||||::....:::|.:||:||||||:::.|
  Rat   158 KAAAGELQEDSGLHVLARLSEIDVSTEGVKGAKNFFEAKVQAINVSSRFEEEIKAEQEERKKQAE 222

  Fly   201 ERAQRRQQFQQRAAIFQ 217
            |..||:..|::..:.|:
  Rat   223 EVKQRKAAFKELQSTFK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Swip-1NP_609925.1 EFh 73..131 CDD:238008 41/57 (72%)
Efhd2NP_001026818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51 3/20 (15%)
EFh 95..153 CDD:238008 41/57 (72%)

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