DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and lhgD

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_417146.2 Gene:lhgD / 948069 ECOCYCID:EG12387 Length:422 Species:Escherichia coli


Alignment Length:406 Identity:160/406 - (39%)
Similarity:233/406 - (57%) Gaps:13/406 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YDLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGTLKARLC 107
            ||.|::||||:|.::|.:::..:|..::|:||||...|.||:||||||||||:||.||:|||:.|
E. coli     2 YDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFC 66

  Fly   108 VEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKDLEKRGIANNVPDLRMIEGSEIQEIEPY 172
            :.|.....|:.|:..|.|...||::|||.:.|::.::.|.:|..||.: :...:...|::|.||.
E. coli    67 LAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGI-EREWLNADELREREPN 130

  Fly   173 CQGVMALHSPHTGIVDWGLVTEHYGQDFKQCGGDIYLDFNVSKFTETKEGTDYPVTIHGAKPGQT 237
            ..|:..:..|.:|||.:..||....:.|:..||:|..:..||...|.|.|    |.|. .:.|..
E. coli   131 ITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNG----VVIR-TRQGGE 190

  Fly   238 VRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYLLLTKEKQHMVKGNIYPVPDPRFPFLGVH 302
            .....:::|.||.:|.|.:..|......|.||||||..|..|...:|...|||:|||..||||||
E. coli   191 YEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVH 255

  Fly   303 FTPRMDGSIWLGPNAVLALKREGYTWGDINLFELFDALRYPGFVKMASKYIGFGLSEMSKSWFIN 367
            .|..:|||:.:|||||||.|||||...|.:..:..:.|...|..::...::..||.||..|...:
E. coli   256 LTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKS 320

  Fly   368 LQIKALQKYIPDITEYDIQRGPAGVRAQAMDLDGNLVDDFVFDRGQGSGALAKRVLHCRNAPSPG 432
            ..::.:|||.|.::..|:|..||||||||:..||.|:|||:|       ....|.:|..|||||.
E. coli   321 GYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLF-------VTTPRTIHTCNAPSPA 378

  Fly   433 ATSSLAIAKMIADKIE 448
            |||::.|...|..|::
E. coli   379 ATSAIPIGAHIVSKVQ 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 151/390 (39%)
lhgDNP_417146.2 PRK11728 1..393 CDD:183292 159/403 (39%)

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