DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment L2HGDH and CG6415

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster


Alignment Length:481 Identity:94/481 - (19%)
Similarity:157/481 - (32%) Gaps:192/481 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QHSSSSCGD------YDLVVVGGGIV----GAA-----SAREIVLRHPSLKVAVLEKECKLAKHQ 83
            :|:||:.|:      ||..|..||.:    |.|     |.:.|:..|             |...|
  Fly    16 RHASSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASH-------------LHTRQ 67

  Fly    84 SGHNSGVIH---AGIYYKPGTLKARLCVEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKD 145
            .|....|.|   :.|:.|    .|..|:|.:..|    |....| :.:|.|.|.|:|.. .:|.|
  Fly    68 VGSIFDVSHMLQSRIFGK----DAAACLESVCTA----DILGTP-EGSGSLTVFTNEAG-GILDD 122

  Fly   146 LEKRGIANNVPDLRMIEGSEIQEIEPYCQGVMALHSPHTGIVDWGLVTEHYGQDFKQCGGDIYLD 210
            |    |.|           ::.|.|.|.....|:.....||:...:      .:||..|.|:.::
  Fly   123 L----IVN-----------KVSEKELYVVSNAAMKEQDMGIMKTAV------DNFKSQGKDVSIE 166

  Fly   211 FNVSKFTETKEGTDYPVTIHGAKPGQTVRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYLL 275
            |                                ||               |.|..:|..:|..  
  Fly   167 F--------------------------------LT---------------PADQSLVAVQGPQ-- 182

  Fly   276 LTKEKQHMVKG-----NIYPVPDPRFPFLGVHFTPRMDGSIWLGPNAVLALKREGYTWGD---IN 332
            :.||...::.|     .:|        |:. .|...:.|.    ||  :.:.|.|||..|   |:
  Fly   183 VAKELSKLLTGKASLDQLY--------FMS-SFVTTLAGI----PN--VRITRCGYTGEDGVEIS 232

  Fly   333 LF-----ELFDALRYPGFVKMA------SKYIGFGLS-------------EMSKSWFINLQIKAL 373
            :.     :|.::|...|.:|:|      |..:..||.             |.:.:|.:..:.:..
  Fly   233 VASSQAQKLTESLLESGVLKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTT 297

  Fly   374 QKYIP--DITEYDIQRG--------------PAGVRAQAMDLDGNLVDDFVFDRGQGSGALAKRV 422
            :.: |  |:....::.|              |...|:...          :|.:||..|.:..  
  Fly   298 RDF-PGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVA----------IFSQGQQVGQVTS-- 349

  Fly   423 LHCRNAPSPGATSSLAIAKMIADKIE 448
                ..|||.|..::|:. .:|:.::
  Fly   350 ----GCPSPSAGRNIAMG-YVAENLK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 84/446 (19%)
CG6415NP_609441.1 gcvT 3..403 CDD:476863 94/481 (20%)

Return to query results.
Submit another query.