DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and L2hgdh

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001101498.1 Gene:L2hgdh / 314196 RGDID:1306250 Length:463 Species:Rattus norvegicus


Alignment Length:424 Identity:226/424 - (53%)
Similarity:308/424 - (72%) Gaps:10/424 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SSSCGDYDLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGT 101
            |||...:|:|:|||||||.||||.::|:||.|.:.|:|||..||.||:|.||||||:||||||.:
  Rat    43 SSSTSSFDIVIVGGGIVGLASARTLILKHPELSIGVVEKEKDLALHQTGRNSGVIHSGIYYKPES 107

  Fly   102 LKARLCVEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKDLEKRGIANNVPDLRMIEGSEI 166
            |||:|||||..|.|.|.:.|.|||::.||||||.:::|:..|:.|.:||:.|.|..||:|:..:|
  Rat   108 LKAKLCVEGAALIYEYCNLKGIPYRQCGKLIVAVEQEEIPRLQALYERGLQNGVQGLRLIQQEDI 172

  Fly   167 QEIEPYCQGVMALHSPHTGIVDWGLVTEHYGQDFKQCGGDIYLDFNVSKF-------TETKEGTD 224
            ::.||||:|:||:..|:||||::..|...:.|||::.||.|..||.|...       ..:|:|..
  Rat   173 KKKEPYCRGLMAIDCPYTGIVNYQQVALSFAQDFQEAGGSILKDFEVKDIGIAKEDPPRSKDGMK 237

  Fly   225 YPVTIHGAKPGQTVRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYLLLTKEKQHMVKGNIY 289
            ||:.:..:| |:.::.:.|:||.||.||.::|.:||..||:||||||:||:|..||.::||||||
  Rat   238 YPIAVKNSK-GKEIQCRYVVTCAGLYSDRISELSGCNPDPQIVPFRGDYLVLKPEKGYLVKGNIY 301

  Fly   290 PVPDPRFPFLGVHFTPRMDGSIWLGPNAVLALKREGYTWGDINLFELFDALRYPGFVKMASKYIG 354
            ||||.|.||||||||||:|||||||||||||.|||||...|.|..::.:.:...||:|:..:...
  Rat   302 PVPDSRLPFLGVHFTPRLDGSIWLGPNAVLAFKREGYRPFDFNARDIMEVILKSGFIKLVFQNFS 366

  Fly   355 FGLSEMSKSWFINLQIKALQKYIPDITEYDIQRGPAGVRAQAMDLDGNLVDDFVFDRGQGSGALA 419
            :|.||:.|:.|::..:|.|||:||:||..|:.||||||||||:|.|||||||||||  .|:|.:.
  Rat   367 YGASEIYKACFLSETVKHLQKFIPEITTNDVLRGPAGVRAQALDRDGNLVDDFVFD--GGAGEIG 429

  Fly   420 KRVLHCRNAPSPGATSSLAIAKMIADKIENEFSI 453
            .|:||.||||||.|||||||::|||::::..|.:
  Rat   430 DRILHVRNAPSPAATSSLAISRMIAEEVQQRFKL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 213/397 (54%)
L2hgdhNP_001101498.1 DAO 61..457 CDD:477422 213/398 (54%)

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