DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and l2hgdh

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_002938171.1 Gene:l2hgdh / 100145085 XenbaseID:XB-GENE-5764342 Length:453 Species:Xenopus tropicalis


Alignment Length:418 Identity:244/418 - (58%)
Similarity:309/418 - (73%) Gaps:10/418 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YDLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGTLKARLC 107
            ||:|||||||||.||||:::||||:|:.||||||.::|.|||||||||||:||||.||:||||||
 Frog    39 YDVVVVGGGIVGLASARQLILRHPALRFAVLEKEKEIALHQSGHNSGVIHSGIYYTPGSLKARLC 103

  Fly   108 VEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKDLEKRGIANNVPDLRMIEGSEIQEIEPY 172
            |.|..|.|.|.|:|.||||:.||||||..:.|:..|:.|.:||:.||||.||:|...:|:|.|||
 Frog   104 VRGAALIYEYCDQKGIPYKQCGKLIVAVKQPEIPRLQALYERGLQNNVPGLRLIGAKDIKEKEPY 168

  Fly   173 CQGVMALHSPHTGIVDWGLVTEHYGQDFKQCGGDIYLDFNVSKFTETKE-------GTDYPVTIH 230
            |:|||||.||:||||::..|.:.|..||...||.:..||.|:......|       |.:|||.|.
 Frog   169 CRGVMALESPYTGIVNYKQVAQSYKDDFCDAGGSVLTDFEVTDIKMVNESPAGSVQGIEYPVAIK 233

  Fly   231 GAKPGQTVRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYLLLTKEKQHMVKGNIYPVPDPR 295
            ..| |:.|..|.||||.||.||.:::.:||..:||||||||:||:|..||.::|||||||||:||
 Frog   234 NNK-GEEVHCKYVLTCAGLFSDRVSQVSGCSAEPRIVPFRGDYLVLKPEKCYLVKGNIYPVPNPR 297

  Fly   296 FPFLGVHFTPRMDGSIWLGPNAVLALKREGYTWGDINLFELFDALRYPGFVKMASKYIGFGLSEM 360
            |||||||||||||||:||||||:||.|||||...|.|..:..:|:.|.|..|:..|.:.:|:.||
 Frog   298 FPFLGVHFTPRMDGSVWLGPNAILAFKREGYRLCDFNARDFKEAVTYSGLHKLVLKNLSYGMGEM 362

  Fly   361 SKSWFINLQIKALQKYIPDITEYDIQRGPAGVRAQAMDLDGNLVDDFVFDRGQGSGALAKRVLHC 425
            .:::|:|.|:|.|||:||:::..||.|||:||||||:|.|||||||||||  .|||.||..:||.
 Frog   363 YRAFFLNAQLKELQKFIPELSFNDIARGPSGVRAQALDRDGNLVDDFVFD--GGSGDLANCILHV 425

  Fly   426 RNAPSPGATSSLAIAKMIADKIENEFSI 453
            ||||||.|||||||::|||.::|..|.:
 Frog   426 RNAPSPAATSSLAISEMIASEVEERFGL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 231/397 (58%)
l2hgdhXP_002938171.1 DAO 51..447 CDD:477422 231/398 (58%)

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