DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and CG17806

DIOPT Version :10

Sequence 1:NP_609904.2 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster


Alignment Length:97 Identity:35/97 - (36%)
Similarity:50/97 - (51%) Gaps:9/97 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 NLPQRNKDR----YTCKFCGKVFPRSANLTRHLRTHTG---EQPYKCKYCERSFSISSNLQRHVR 359
            ||..|.|.|    |.||:|||.|........|.|.|..   .:|:.|..|:::|..|:.|:.|: 
  Fly   304 NLHVRIKHRGELPYVCKYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALKDHI- 367

  Fly   360 NIHNKERPFKCEICERCFGQQTNLDRHLK-KH 390
            .:|..|:||.||:|:..|.::..|..|.| ||
  Fly   368 VVHTGEQPFHCELCQTFFNRRNALATHYKSKH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_609904.2 zf-C2H2 311..333 CDD:395048 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:463886 6/26 (23%)
C2H2 Zn finger 341..362 CDD:275368 6/20 (30%)
zf-C2H2 368..390 CDD:395048 8/22 (36%)
C2H2 Zn finger 370..390 CDD:275368 7/20 (35%)
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..311 CDD:275368 3/6 (50%)
C2H2 Zn finger 319..339 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 6/20 (30%)
ZnF_U1 375..407 CDD:197732 11/25 (44%)
C2H2 Zn finger 378..396 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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