DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and zld

DIOPT Version :10

Sequence 1:NP_609904.2 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_608356.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:688 Identity:136/688 - (19%)
Similarity:237/688 - (34%) Gaps:235/688 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HSPRKMLPSPKQGCVY----------PALGLIPTSYISH--------VPYDLASSASVAATSSSS 52
            :||..:....:||..:          |.:|::|...:.:        :|......:::...||:|
  Fly   914 NSPHTIYRQEQQGTDFSRTTPPPQPLPPMGMLPPMAMDYNMLALDMPMPMPTLMHSNMLQCSSTS 978

  Fly    53 TSPTTTSATTT---------GRLQHQHS------HQ------QHQTLNHHAKGKRRSSFDQPLDL 96
            |:|..|:.||:         .:|.|.:.      ||      |.|..:||.:.:.....||    
  Fly   979 TTPLATTITTSMPDTMQPPQQQLVHHYQAVLHPLHQQLGEQHQRQEADHHQQQRELHQLDQ---- 1039

  Fly    97 RLAHKRKTDLVDQGPMEDEN-------SNLIMFASELAVAQQKEKELNNNHIAASLADLGFDMSR 154
            :...::...|.|..|....:       ..:.|..:.:...|....:....||.:::     .|..
  Fly  1040 QQQQQQALILADSLPHSSSSPTSSSPPPTMPMPLTTITAPQLLPLQPPPPHITSTM-----PMPP 1099

  Fly   155 KMLRALREGGAGGGGGGGGGGGGGGGPPNAPPLTPPQC--SIPAVHPTLL---------EAMT-- 206
            .|                       ..|..||  ||||  .:..:.||:.         ||.|  
  Fly  1100 TM-----------------------HMPIMPP--PPQCYQQLQPLDPTMSYHTIIGSGPEAHTGT 1139

  Fly   207 --------------KNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFPFRHPLKKC--------- 248
                          :.|.|...::||...|....|.||..||...|.|..|.|...         
  Fly  1140 AGGGYSNQITTSDGQILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDLPPVHTLTTALHAHQQGGQ 1204

  Fly   249 ---------ELTWP-PPT--------------------------EQLQLELPHPNPKLSPVLPHP 277
                     .|:.| .||                          ||.|::    :.:|..:..|.
  Fly  1205 QEAQTPTLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQ----HQQLDQMQQHQ 1265

  Fly   278 QLQDYQTRRK---NKARTAA--------TGGNATPNLPQRNKD----------------RYTCKF 315
            |..|:|.:::   ::.:|.|        .||||||:..:|.::                |..|..
  Fly  1266 QQLDHQQQQQILADQTQTMAQQPLAKKRRGGNATPSTTKRRRNSSVGSTSPHSTTLPSGRIKCLE 1330

  Fly   316 CGKVFPRSANLTRHLRT-HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQ 379
            |.|.|.::..||:|.:: |:||.|::|:.|.:.|........|:.....:::|.|||:|.:.|..
  Fly  1331 CDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCELCPKQFHH 1395

  Fly   380 QTNLDRH-------LKKHESDAVSLSALSGVSERMHCIRRFCENPTEESYFEEIRSFMGKVTQQQ 437
            :|:|.||       ||:|..|.              |.:.||..       :.:|..:       
  Fly  1396 KTDLRRHVEAIHTGLKQHMCDI--------------CEKGFCRK-------DHLRKHL------- 1432

  Fly   438 QQQQQQQQHDQQQQQHQSTATSASSSCSSSRDTPTSSHEEADHAPATSTADTAAPSSSRDQEEED 502
                  :.|::.:...:.:|.:|:::.:::..|.|:.   ...|||..:. .||.:.|.......
  Fly  1433 ------ETHNRPRVVGKKSAAAAAAAAAAAAVTATAG---LGGAPAAGSI-KAAFARSLTVTAVS 1487

  Fly   503 SQP---IMELKRTLTSKLFPTTTADSAM---TTPQTTS 534
            |:|   :.......|:...|.:.:.||:   ..|..||
  Fly  1488 SEPGAGVAIPSAPATATCAPVSVSASALVQAVNPSLTS 1525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_609904.2 zf-C2H2 311..333 CDD:395048 7/22 (32%)
C2H2 Zn finger 313..333 CDD:275368 7/20 (35%)
zf-H2C2_2 325..349 CDD:463886 9/24 (38%)
C2H2 Zn finger 341..362 CDD:275368 4/20 (20%)
zf-C2H2 368..390 CDD:395048 11/28 (39%)
C2H2 Zn finger 370..390 CDD:275368 10/26 (38%)
zldNP_608356.1 zf-C2H2_jaz 552..577 CDD:432381
SUF4-like 1325..>1366 CDD:411020 15/40 (38%)
C2H2 Zn finger 1328..1349 CDD:411020 7/20 (35%)
C2H2 Zn finger 1328..1349 CDD:275368 7/20 (35%)
C2H2 Zn finger 1357..1377 CDD:275368 4/19 (21%)
C2H2 Zn finger 1386..1407 CDD:275368 8/20 (40%)
zf-C2H2 1413..1435 CDD:395048 6/55 (11%)
C2H2 Zn finger 1415..1435 CDD:275368 5/53 (9%)
Blue background indicates that the domain is not in the aligned region.

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