DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and mecom

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_031758134.1 Gene:mecom / 100496511 XenbaseID:XB-GENE-980195 Length:1057 Species:Xenopus tropicalis


Alignment Length:512 Identity:150/512 - (29%)
Similarity:215/512 - (41%) Gaps:153/512 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PYDLASSASVAATSSSSTSPTTTSATTTGRLQHQHSHQQHQTLNHHAKGKRRSSFDQPLDLRLAH 100
            |:||.:...  ...:|..:|:.:.|.|:.              ||          ||||||.::.
 Frog   554 PFDLTTKRK--EEKASPNAPSKSGAPTSS--------------NH----------DQPLDLSISS 592

  Fly   101 KRKTDLVDQGPMEDENSNLIMFASELAVAQQKEKELNNNHIAASLADLGFDMSRKMLRALREGGA 165
            :.:                        .:..|:.|...|||.....|:..::.:.....|:.   
 Frog   593 RSR------------------------ASTTKQTEARKNHIFGEKKDIDPELPKTSDHCLQH--- 630

  Fly   166 GGGGGGGGGGGGGGGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAA 230
                           |..||....|      ::...:|...:..||:       :|..|...|  
 Frog   631 ---------------PRPAPFFMDP------IYRYRVEKRKQLDPLE-------LLKEKYLRP-- 665

  Fly   231 SSSPTGADFPFRHPLKKCELTWPPPTEQLQLEL-------PHPNPKLSPVLPHPQLQDYQTRRKN 288
              || |..|..:.||.. :.||....|.:..:|       |..|..:..|   |.:.:::     
 Frog   666 --SP-GFLFHPQFPLPD-QRTWMSAIENMAEKLESFNALKPEANELIQSV---PSMFNFR----- 718

  Fly   289 KARTAATGGNATP-NLPQRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISS 352
                  ...:|.| ||.::.|:||||::|||:||||||||||||||||||||:||||:|||||||
 Frog   719 ------PSSSALPENLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISS 777

  Fly   353 NLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMHCIRRFCENP 417
            |||||||||||||:||||.:|:|||||||||||||||||:..:|.:|.|.....:.......:: 
 Frog   778 NLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNLSGTAASSPHSEIEGTGAILDD- 841

  Fly   418 TEESYFEEIRSFMGKVTQQQQQQQQQQQ-----HDQQQQQHQST--------------------- 456
            .|:|||.|||:|:|.....:|......:     ||:.....|::                     
 Frog   842 KEDSYFNEIRNFIGNSGHNKQSPLNSDERINGNHDKIMLTGQNSDLLDDDEIEDEAILDEDDEES 906

  Fly   457 -----------ATSASSSCSSSRDTPTSSHEEADHAPATSTADTAAPSSSRDQEEED 502
                       |::....||:      ..:||...:........:......|.||||
 Frog   907 DIAVKVMKEPNASAMLEKCSA------DEYEEGSKSEVNCKVSPSRYDDDDDDEEED 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 51/63 (81%)
zf-C2H2 311..333 CDD:278523 18/21 (86%)
C2H2 Zn finger 313..333 CDD:275368 16/19 (84%)
zf-H2C2_2 325..349 CDD:290200 21/23 (91%)
C2H2 Zn finger 341..362 CDD:275368 19/20 (95%)
zf-H2C2_2 353..377 CDD:290200 19/23 (83%)
zf-C2H2 368..390 CDD:278523 18/21 (86%)
C2H2 Zn finger 370..390 CDD:275368 16/19 (84%)
mecomXP_031758134.1 C2H2 Zn finger 23..73 CDD:275368
SUF4-like 77..>123 CDD:411020
C2H2 Zn finger 77..102 CDD:411020
C2H2 Zn finger 77..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368
C2H2 Zn finger 105..123 CDD:411020
C2H2 Zn finger 133..155 CDD:275368
C2H2 Zn finger 163..183 CDD:275368
zf-C2H2 189..211 CDD:395048
C2H2 Zn finger 191..211 CDD:275368
C2H2 Zn finger 220..238 CDD:275368
PHA00733 692..788 CDD:177301 57/109 (52%)
zf-C2H2 736..758 CDD:395048 18/21 (86%)
C2H2 Zn finger 738..758 CDD:275368 16/19 (84%)
zf-H2C2_2 750..774 CDD:404364 21/23 (91%)
C2H2 Zn finger 766..787 CDD:275368 19/20 (95%)
zf-C2H2 793..815 CDD:395048 18/21 (86%)
C2H2 Zn finger 795..815 CDD:275368 16/19 (84%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11069
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D254483at33208
OrthoFinder 1 1.000 - - FOG0002720
OrthoInspector 1 1.000 - - otm47956
Panther 1 1.100 - - O PTHR24393
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

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