Sequence 1: | NP_001286059.1 | Gene: | CG10348 / 35132 | FlyBaseID: | FBgn0032707 | Length: | 540 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031761546.1 | Gene: | prdm16 / 100485690 | XenbaseID: | XB-GENE-991670 | Length: | 1307 | Species: | Xenopus tropicalis |
Alignment Length: | 570 | Identity: | 175/570 - (30%) |
---|---|---|---|
Similarity: | 239/570 - (41%) | Gaps: | 183/570 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MREKD------HS--PRKMLPS-PKQGCVYPAL-------GLI----PTSYISHVPYDLASSASV 45
Fly 46 AATSSSSTSPTTT------SATTTGRLQHQHSHQQHQTLNHHAKGKRRSSFDQPLDLRLAHKRKT 104
Fly 105 DLVDQGPMEDENSNLIMFASELAVAQQKEKELNNNHIAASLADLGFDMSRKMLRALREGGAGGGG 169
Fly 170 GGGGGGGGGGGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSP 234
Fly 235 TGADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQ---LQDYQTRRKNKARTAATG 296
Fly 297 GNATPNLP------------------QRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKY 343
Fly 344 CERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMH 408
Fly 409 CIRRFCEN----------PTEESYFEEIRSFMGKVTQQQQQQQQQQQHDQQQQQHQSTATSASSS 463
Fly 464 CSSSRDTPTSSHEEADHAPATSTA----DTAAPS----SSRDQEEEDSQP 505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG10348 | NP_001286059.1 | COG5048 | 300..>363 | CDD:227381 | 50/80 (63%) |
zf-C2H2 | 311..333 | CDD:278523 | 18/21 (86%) | ||
C2H2 Zn finger | 313..333 | CDD:275368 | 16/19 (84%) | ||
zf-H2C2_2 | 325..349 | CDD:290200 | 21/23 (91%) | ||
C2H2 Zn finger | 341..362 | CDD:275368 | 19/20 (95%) | ||
zf-H2C2_2 | 353..377 | CDD:290200 | 19/23 (83%) | ||
zf-C2H2 | 368..390 | CDD:278523 | 18/21 (86%) | ||
C2H2 Zn finger | 370..390 | CDD:275368 | 16/19 (84%) | ||
prdm16 | XP_031761546.1 | SET | 61..222 | CDD:394802 | |
C2H2 Zn finger | 232..258 | CDD:275368 | |||
zf-C2H2 | 278..300 | CDD:395048 | |||
C2H2 Zn finger | 280..300 | CDD:275368 | |||
zf-H2C2_2 | 292..316 | CDD:404364 | |||
C2H2 Zn finger | 308..328 | CDD:275368 | |||
C2H2 Zn finger | 336..387 | CDD:275368 | |||
zf-C2H2 | 396..418 | CDD:395048 | |||
C2H2 Zn finger | 398..418 | CDD:275368 | |||
C2H2 Zn finger | 426..449 | CDD:275368 | |||
C2H2 Zn finger | 458..476 | CDD:275368 | |||
zf-C2H2 | 982..1004 | CDD:395048 | 18/21 (86%) | ||
C2H2 Zn finger | 984..1004 | CDD:275368 | 16/19 (84%) | ||
zf-H2C2_2 | 996..1020 | CDD:404364 | 21/23 (91%) | ||
SUF4-like | 1012..>1067 | CDD:411020 | 46/54 (85%) | ||
C2H2 Zn finger | 1012..1038 | CDD:411020 | 24/25 (96%) | ||
C2H2 Zn finger | 1012..1033 | CDD:275368 | 19/20 (95%) | ||
C2H2 Zn finger | 1041..1062 | CDD:411020 | 17/20 (85%) | ||
C2H2 Zn finger | 1041..1061 | CDD:275368 | 16/19 (84%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I11069 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D254483at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002720 | |
OrthoInspector | 1 | 1.000 | - | - | otm47956 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |