DRSC/TRiP Functional Genomics Resources

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Protein Alignment IFT46 and ift46

DIOPT Version :10

Sequence 1:NP_609890.2 Gene:IFT46 / 35114 FlyBaseID:FBgn0032692 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001333179.1 Gene:ift46 / 565922 ZFINID:ZDB-GENE-080102-3 Length:355 Species:Danio rerio


Alignment Length:417 Identity:118/417 - (28%)
Similarity:168/417 - (40%) Gaps:127/417 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDEEITIGGPD--SKHLSSVQMEPR---NGGTGGGRGGAGGGGPGAVGGEGAVRRAAAGRHRRMF 63
            |||...:...:  |.|..|    ||   :..||..:.....|..|....|...|:.......|..
Zfish    17 YDESFEVNAEEAASVHTPS----PRQIVSRRTGRQKQSTMSGYAGEKLEEDTKRKKEPPPGPRGA 77

  Fly    64 QNNSTDDDGLLQDIIDHDDEAEDSEDDDDSEMQLPQGMTMGVGMTGLVPGPNMQKRPGSNRSSKQ 128
            ..|..::        |.||  :|.:|||||                                   
Zfish    78 NKNDEEE--------DEDD--DDDDDDDDS----------------------------------- 97

  Fly   129 VPDDTLSSGSEEAAMGGRMGSGGARGGAKLPHQKLTLPMRGSASGAGRSKRQDDQSFIMSADKWE 193
              |||.|...||.       .|.|..||..|                             || :|
Zfish    98 --DDTESDEEEEE-------PGSAPEGAYDP-----------------------------AD-YE 123

  Fly   194 DLSVPGELKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPPLLQPQRQKDLND 258
            .|.|.||:||||.||.:||||||:....|:||||:|:|||||:||.|||..|           :.
Zfish   124 HLPVTGEIKELFQYITRYTPQTIELDHKLKPFIPDFIPAVGDIDAFLKVPRP-----------DG 177

  Fly   259 HLEKLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRNPRHASSASLVPTARSGKDIEKWITEVE 323
            ..:.|||.:||||...||:|::|::.|.   ..|...|.......|:....::.|.||.||..:.
Zfish   178 KPDNLGLLVLDEPCTKQSDPTVLSLWLS---ENSKQHNVTEVKIKSIENPEKNPKAIENWIESIS 239

  Fly   324 QVHMTQ---SMYDVQPRKDIDALLEDWPRSFGDEQTINA--LDQAYRSCLQQNISVAEYVGVLCE 383
            ::|.::   :::..:|..|||:|:::||..|  |:.:..  |..|...|     .:||||.::| 
Zfish   240 ELHRSKPPATVHYTRPMPDIDSLMQEWPSEF--EELLGKVNLPTADIDC-----DLAEYVDMIC- 296

  Fly   384 RFGVEGPLESQA--DYIHNVQTLFALY 408
                 |.|:...  :.||::..||.||
Zfish   297 -----GILDIPVYKNRIHSLHVLFTLY 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IFT46NP_609890.2 IFT46_B_C 188..409 CDD:463532 82/228 (36%)
ift46NP_001333179.1 IFT46_B_C 118..319 CDD:463532 83/258 (32%)

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