DRSC/TRiP Functional Genomics Resources

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Protein Alignment IFT46 and Ift46

DIOPT Version :10

Sequence 1:NP_609890.2 Gene:IFT46 / 35114 FlyBaseID:FBgn0032692 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_017451042.3 Gene:Ift46 / 300675 RGDID:1307682 Length:386 Species:Rattus norvegicus


Alignment Length:423 Identity:111/423 - (26%)
Similarity:169/423 - (39%) Gaps:142/423 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDEEITIGGPDSKHLSSVQMEPRNGGTGGGRGGAGGGGPGAVGGEGA----------VRRAAAGR 58
            |||.:.|.  ||:.::|:. .|..|..|.....|   .|..|..:.:          .::.:...
  Rat    50 YDERLEIN--DSEEVASIS-TPTPGHQGPPFSAA---LPSKVMADNSSDEYEEDNKEKKKPSQLT 108

  Fly    59 HRRMFQNNSTDDDGLLQDIIDHDDEAE-DSEDDDDSEMQLPQGMTMGVGMTGLVPGPNMQKRPGS 122
            .::.|..|..|||         ||.:| ||:||||.|                            
  Rat   109 PQQGFSENDDDDD---------DDSSETDSDDDDDDE---------------------------- 136

  Fly   123 NRSSKQVPDDTLSSGSEEAAMGGRMGSGGARGGAKLPHQKLTLPMRGSASGAGRSKRQDDQSFIM 187
                            |..|                       |:.|:...|             
  Rat   137 ----------------EHGA-----------------------PLEGAYDPA------------- 149

  Fly   188 SADKWEDLSVPGELKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAP---PLLQ 249
               .:|.|.|..|:||||.||.:||||.||....|:||||:|:|||||:||.|||..|   |   
  Rat   150 ---DYEHLPVSAEIKELFEYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGKP--- 208

  Fly   250 PQRQKDLNDHLEKLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRN-PRHASSASLVPTARSGK 313
                    ||   |||.:|||||..||:|::|::.|   ...|...| .:|....||....::.|
  Rat   209 --------DH---LGLLVLDEPSTKQSDPTVLSLWL---TENSKQHNITQHMKVKSLEDAEKNPK 259

  Fly   314 DIEKWITEVEQVHMTQ---SMYDVQPRKDIDALLEDWPRSFGDEQTINALDQAYRSCLQQNISVA 375
            .|:.||..:.::|.::   :::..:|..|||.|:::|...|.:     .|.:.....::.:.|:|
  Rat   260 AIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEE-----LLGKVSLPTVEIDCSLA 319

  Fly   376 EYVGVLCERFGVEGPLESQADYIHNVQTLFALY 408
            ||:.::|....:  |.....  |.::..||:||
  Rat   320 EYIDMICAILDI--PFYKSR--IQSLHLLFSLY 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IFT46NP_609890.2 IFT46_B_C 188..409 CDD:463532 78/228 (34%)
Ift46XP_017451042.3 None

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